Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111193040 |
| gene name | NA |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 932017 ~ 938184 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_022671888.1 | True | 651 | mRNA | 0.49 | 3 | 932017 | 938184 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103044579 | NA | coding | downstream | 735734 | 178319 ~ 196283 (-) |
| rps5 | rps5 | coding | upstream | 36911 | 975095 ~ 982603 (-) |
| LOC103041113 | ppt2 | coding | upstream | 50262 | 988446 ~ 1005877 (-) |
| LOC103026956 | ctnna1 | coding | upstream | 1059972 | 1998156 ~ 2220364 (-) |
| LOC103026657 | tspan17,LOC108436843,LOC107749748,LOC107680656 | coding | upstream | 1497496 | 2435680 ~ 2488996 (-) |
| LOC103022920 | NA | coding | upstream | 1562804 | 2500988 ~ 2535981 (-) |
| G70477 | NA | non-coding | downstream | 17768 | 913078 ~ 914249 (-) |
| G70457 | NA | non-coding | downstream | 78412 | 845038 ~ 853605 (-) |
| G70455 | NA | non-coding | downstream | 91863 | 836229 ~ 840154 (-) |
| G70454 | NA | non-coding | downstream | 103461 | 826913 ~ 828556 (-) |
| G70443 | NA | non-coding | downstream | 150324 | 780327 ~ 781693 (-) |
| G70489 | NA | non-coding | upstream | 82551 | 1020735 ~ 1020992 (-) |
| G70502 | NA | non-coding | upstream | 149659 | 1087843 ~ 1088144 (-) |
| G70508 | NA | non-coding | upstream | 177743 | 1115927 ~ 1117269 (-) |
| G70512 | NA | non-coding | upstream | 207599 | 1145783 ~ 1146014 (-) |
| G70515 | NA | non-coding | upstream | 226019 | 1164203 ~ 1164470 (-) |
| LOC103042850 | cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 | other | upstream | 71702 | 1009886 ~ 1035016 (-) |
| tnip1 | tnip1,LOC107594924,LOC107750363 | other | upstream | 1766011 | 2704195 ~ 2745072 (-) |
| G70924 | ndufb9 | other | upstream | 2341972 | 3280156 ~ 3353599 (-) |
| LOC111193045 | LOC108442482,LOC102793828 | other | upstream | 2505911 | 3444095 ~ 3458810 (-) |
| LOC103023864 | NA | other | upstream | 2637377 | 3575561 ~ 3703751 (-) |
