LOC103022766


Basic Information

Item Value
gene id LOC103022766
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 13833553 ~ 13848142 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671890.1
GCAAGACCAGTGAACGTGTCTCAAAGAGTTCCGCGTAGTTTACAGTTACTCACTCATTTTAGCAGCCAACAAAACTAACAGCAACTTTTAGAGAACTCAAAACGCCCTGAGGACCAGTATATGTGAATCTCACAGGTTACTTGAAGACATCTTGAAGCTCAGCTGAACAGCCTTCTTCACAAAAATGGCCAACTATTTAATGGATCTGAGCGAAGAAAAGCAGAGGATTGCAGAAGAAGCAAGAAAGGCTACCTCTGAGATAATACAGGATGCTATTGATAAAGAGTGTTACGGCCTCCCAGTCACCTTCCATATGACTAATTGTCCAGAACCATTCGAGTCCCACACGTTCTGCTGCATTCCCACCAAGGAATTTCTGCAGAATCTTCTAGCCAAGCTCAGTGAAGCACGTTTCATAGAGGACACAGACCCTGCAGAGAGTGAAACCTTTGCTTATGTCACTCCACAGGATAACGAtggcattatttatttgtgtgaagCGTTCTGGGAGGCAGGAGACACACTGTGTGAAGATTCAAAGCCTGGAACACTAATCCATGAAGTTTCGCATCTGTTGGGTACAGAGGACATCTTTTATGAACACATGACTTTAGAGTTCTATGAAAACTATGGAACTCTGCTGGGCAAGTCACAATTTTGCATACATGTTAATGGAAAGGAATTTAACGAGGAAGTGTTTCAGGTGAATGCCAACAGCCTAGAGCATGAATTTGAGACCATCATCAACCATGAGGGAGCATACTCTGATGGTAAATACCAGTGCTGTGGAGAAACCAAGAAATACTCTGTTTGCACACATCGCTTTAGAGGCCATTACTATCTGCATGAAAGACtttCCGCCGAAAAAGATCTGATGGAGCGCAAGCTGGCAAAGTTTCGGGAAGAGATAGCTGCTCGCACAAACCAGCAAGAAAAGATCAAATATGTGAAGAAAAAGAACCAGGCCTGCGAGAAGATTCCTGTTATTGAGGCCTGAAAACAACCAGAGGAAATACGTTCAGCTTCCATGATAATAAATGCTAAGATTAATTTAGTTAACCTGAATCCAAACAGTAGGGTATTAGAGATCAATATTTCAGATGCTACATATACATATGTTTGGAtatgctgtttgtttgttcatttattcactagtgtaagaaaaatacatattagtATTAGTGTTCAGTGTTAGCTCTTTAGGTCTGCATTTCATCCTCTTCAAGTTAGCAGGTGTATGCAATTTATGTTCACTGATTAATGTCACTTTTCTTTTGTAGTGAGTCATATTTAACCTACTATGTTACAAAAGATTATGTACAATTCAATTTACCAGAGcattgtttttgtgattttaatttCTTCTTTGTGTATTCCATAGCTCtattctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671890.1 True 1392 mRNA 0.40 3 13833553 13848142

Neighbor

gene id symbol gene type direction distance location
rag2 rag2,LOC107581808,LOC107720771,LOC107673237,LOC107750738,LOC107670203 coding downstream 884114 12944453 ~ 12949439 (-)
LOC103043208 furin,furinb,LOC107581806,LOC107720773,LOC107750721 coding downstream 962171 12722277 ~ 12871382 (-)
unc45a unc45a coding downstream 1159031 12662741 ~ 12674522 (-)
gdpgp1 NA coding downstream 1171746 12658893 ~ 12661807 (-)
rhcg rhcg coding downstream 1181637 12638871 ~ 12651916 (-)
slc1a2 slc1a2,slc1a2b,LOC107740049,LOC107570361 coding upstream 13408 13861550 ~ 13909603 (-)
pamr1 pamr1,LOC102307280,LOC107570358 coding upstream 72031 13920173 ~ 13964026 (-)
LOC103024229 LOC108428793 coding upstream 542543 14390685 ~ 14460388 (-)
cib1 cib1,kip1 coding upstream 702730 14550872 ~ 14554955 (-)
LOC103040849 LOC108428736,LOC104940688,LOC108274568 coding upstream 718768 14566910 ~ 14574221 (-)
G73371 NA non-coding downstream 2796 13828718 ~ 13830757 (-)
G73322 NA non-coding downstream 416091 13416657 ~ 13417462 (-)
G73302 NA non-coding downstream 595239 13237953 ~ 13238314 (-)
G73281 NA non-coding downstream 745117 12989186 ~ 13088436 (-)
G73238 NA non-coding downstream 971925 12861113 ~ 12861628 (-)
G73429 NA non-coding upstream 158610 14006752 ~ 14007149 (-)
G73432 NA non-coding upstream 189927 14038069 ~ 14038368 (-)
G73434 NA non-coding upstream 222357 14070499 ~ 14072038 (-)
G73491 NA non-coding upstream 428537 14276679 ~ 14277106 (-)
G73509 NA non-coding upstream 619480 14467622 ~ 14468141 (-)
G73172 NA other downstream 1212197 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 1268575 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 1782064 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 2288307 11520887 ~ 11545246 (-)
LOC111193093 NA other downstream 2607599 11224779 ~ 11225954 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other upstream 694054 14542196 ~ 14545536 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 860916 14709058 ~ 14797283 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 1275672 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 1533187 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 1910161 15758303 ~ 15780678 (-)

Expression


Co-expression Network