LOC111193055


Basic Information

Item Value
gene id LOC111193055
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14687689 ~ 14690107 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671917.1
ATGATCCCCAAAAAAACCAAGGATGTAGTCGGACCCACCGTTTTTTCGGCGGACAGCGGAATACCCAGACGGCGAAAAACTGATTCCAGGGAGGGGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGCGCTGGCGGGGGGCGTGCTGGCGGGGGGCGCGCTGGCGGGGGGGGCTGGAGAGGGGGCCACAAGCGAGCAGGCAGAGACGGGCCTGCGCAGAGAACAGACAATGGTAATCGTAGAATCCAGAACCCCCATAGCGCACGGCCAGGTCGAGGATAATGGAAAGGTAGTCGTCGAGTTCCTGACGGCGGGCTGGAAAAGCCGCGCAGAGCACGTCTCGAAAGGTGGAGAAAGCAAGGGCGAATTCGGGGGCAGAGAGAACTCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671917.1 True 2067 mRNA 0.88 3 14687689 14690107

Neighbor

gene id symbol gene type direction distance location
gpr22 gpr22,gpr22b,LOC108428781,LOC107754326,LOC107676451,LOC107561157,LOC107701065 coding downstream 38438 14640001 ~ 14649251 (-)
LOC103028140 golt1bb,LOC107551388,LOC107676462,LOC108428784,LOC107754325,LOC107701063 coding downstream 68301 14614391 ~ 14619388 (-)
LOC103041151 NA coding downstream 109171 14574795 ~ 14578518 (-)
LOC103040849 LOC108428736,LOC104940688,LOC108274568 coding downstream 113468 14566910 ~ 14574221 (-)
cib1 cib1,kip1 coding downstream 132734 14550872 ~ 14554955 (-)
prkar2b prkar2b,LOC108275286,LOC107732287,LOC107551419,LOC107676465 coding upstream 28447 14718554 ~ 14733253 (-)
mphosph6 mphosph6 coding upstream 133111 14823218 ~ 14826889 (-)
snx20 snx20 coding upstream 137297 14827404 ~ 14831477 (-)
LOC103033621 NA coding upstream 159475 14849582 ~ 14857596 (-)
rbl2 rbl2 coding upstream 178825 14868932 ~ 14889755 (-)
G73606 NA non-coding downstream 10831 14675881 ~ 14676858 (-)
G73540 slc25a3,LOC107569351,LOC107732290 non-coding downstream 81729 14597951 ~ 14605960 (-)
G73509 NA non-coding downstream 219548 14467622 ~ 14468141 (-)
G73491 NA non-coding downstream 410583 14276679 ~ 14277106 (-)
G73434 NA non-coding downstream 615651 14070499 ~ 14072038 (-)
G73617 dus2,LOC107555686 non-coding upstream 55063 14745170 ~ 14748658 (-)
G73622 NA non-coding upstream 66792 14756899 ~ 14757248 (-)
G73605 NA non-coding upstream 107248 14797355 ~ 14800633 (-)
G73639 NA non-coding upstream 114124 14804231 ~ 14805502 (-)
G73642 NA non-coding upstream 128395 14818502 ~ 14818812 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 142153 14542196 ~ 14545536 (-)
G73172 NA other downstream 2066333 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 2122711 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 2636200 12048626 ~ 12051489 (-)
LOC111193052 NA other downstream 3142443 11520887 ~ 11545246 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 18951 14709058 ~ 14797283 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 433707 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 691222 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 1068196 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 1776982 16467089 ~ 16470323 (-)

Expression


Co-expression Network