LOC103044579


Basic Information

Item Value
gene id LOC103044579
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 178319 ~ 196283 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671930.1
TCTTCCTATCTCAGAGTCCAAACAGCACAACACATCTCAGTGTTCAGCAGCGTTAAGGATGAACCAGAAATCTCCTCAGCTGATCTATCTCTTCCAGGCAGTGCTGGTGGGAGCCATCATGGCCTGCATGATCCTGATGAACCCGATCCAGCCGGATCTCCTGGTGCAGGAGGCCTGCGGCTGTATGGAGTGTATGAGAAATGTAGAAGTGGATCCCTGGTACGCTAAACGCTACAACAGCCAGGTGCCCAGACTTATGTACACTCAAAACAGCAACCTCAGCAGCAGCACCGACAAATGGTGGCAGAGTCTTCAGGGTCGACCCAAAAACATGAACTACACTGCGATTGTGGAGACGATTTTCTCGATGTTTCCTGATGAAAATCACTATTCAGATTCTGGTCCTGATCGCTGCAGACTGTGTGCTCTGGTGGGAAACTCTGGCAACCTGGAAGGATCTCATTATGGACCATTAATAGATGCTCACGACTTCGTCATAAGGATTAATGCAGGTCCTACTGAAGGCTATGAGAGAGATGTTGGCTCGAAGACCACCCATCGCGCCATGTACCCCGAGAGCGCTGTGGACATAGACAACTCCACCCACTTCGTCCTGATACCGTTTAAAATGATTGATCTGAAGTGGATCGTCAGCATCTTCACCACCAAACACATCACACGAAGTCCTAGAAAAGTGAAAAGCTCAGTACAAGCAAACATGGACAAGGTGATGATCTTGCATCCTGAGTTTATAAAGTACGTCCATGAAAACTGGCTGGAGAAAAAGGGCAGATATCCCTCCACTGGATTCATAATGCTAGTCTTATCACTGCACATCTGTGATCAGgtGAACGTATTTGGATTTGGTGCCAGTAAAAGTGGCGTCTGGCACCATTACtttgacaaaaaatataatgtttttcacAACACAAATAACCACAAGGGAGGCAATGAATACAACCTCATTCTGCAACTCGAGAAGAAGAAGTGGATCCGTCTTTATAAAGGACTTTAATATTCAGCCGggaataattatttattgtaatttattgaCTATCATATGGAGTGacactgtatgtactgtataagGGAGATGGGagcagttttaaaaataatattactgtGCTGATTGTGACTTTTTTTGACTAATTTATAGAATTATCTTTCTAAGGCTGGGATATACATGTATCTAATGTTGGTTTTACTATAGCTGTAACTGAAATGGATGCACTAGACAGCAAAAATCACTCCATTTGTACCGATACTCCATTTGTACCGATACTCCATTTGTACCGATACTCATTTGTACAGATACTCCATTTGTACCGATACTCCATTTGTACCGATACTCCATTTGTACCGATACTCCATTTGTACCGATACTCCATTTGTATCGATACTCAATTTGTACAGATACTCAATTTGTACAGATACTCAATTTGTACCGATACTCCATTTGTACCGATACTCCAATTTTGTACCGATACTCAATTTGTACCGATACTCCATTTGTACCGATACTCCATTTGTACCGATACTCCATTTGCATCGATACTCCATTTGTACCGATACTCCATTTGTACCGATACTCCATTTGTACCGATACTCCATTTGCATCGATACTCAATTTGTATCGATACTCAATTTGTACAGATACTCAATTTGTACAGATACTCAATTTGTACCGATACTCCATTTGTATCGATACTCAATTTGTACCGATACTCAATTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671930.1 True 1734 mRNA 0.42 6 178319 196283

Neighbor

gene id symbol gene type direction distance location
LOC111193040 NA coding upstream 735734 932017 ~ 938184 (-)
rps5 rps5 coding upstream 778812 975095 ~ 982603 (-)
LOC103041113 ppt2 coding upstream 792163 988446 ~ 1005877 (-)
LOC103026956 ctnna1 coding upstream 1801873 1998156 ~ 2220364 (-)
LOC103026657 tspan17,LOC108436843,LOC107749748,LOC107680656 coding upstream 2239397 2435680 ~ 2488996 (-)
G70190 NA non-coding downstream 139288 37030 ~ 39031 (-)
LOC111193064 NA non-coding upstream 87393 283676 ~ 287042 (-)
G70299 NA non-coding upstream 195079 391362 ~ 391707 (-)
G70316 NA non-coding upstream 215302 411585 ~ 411826 (-)
G70317 NA non-coding upstream 224170 420453 ~ 420734 (-)
LOC111193066 NA non-coding upstream 239954 436237 ~ 445529 (-)
LOC103042850 cratb,LOC108435838,LOC108274804,LOC107561339,LOC107758403,LOC105903715,LOC107563340,LOC107679039 other upstream 813603 1009886 ~ 1035016 (-)
tnip1 tnip1,LOC107594924,LOC107750363 other upstream 2507912 2704195 ~ 2745072 (-)
G70924 ndufb9 other upstream 3083873 3280156 ~ 3353599 (-)
LOC111193045 LOC108442482,LOC102793828 other upstream 3247812 3444095 ~ 3458810 (-)
LOC103023864 NA other upstream 3379278 3575561 ~ 3703751 (-)

Expression


Co-expression Network