dpy19l4 (dpy19l4)


Basic Information

Item Value
gene id dpy19l4
gene name dpy19l4
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 4306665 ~ 4339082 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671984.1
AGGAGCCTCCGTAGCAGCTCTGCAAAGTTGAGACGGCCCGAGTCGAATCGCCGGATGAACTTGTTTGGGTTTAGTTTCTAGAggttattagaaaaaaaaagcagcattaATGGGGCTTTTAAACCGGATAGGCTGTTAAACAAGAACCCAAACACATGAACCTGAGCCGAAACAGCGTTTAATTCGGTTTAGTTTCGCGTCAAACTGGATACATAGCTAGCGTTAAGACCTTAACTTCAGCTTCAGCTACAGCTACAGCTAGCCTAGCCGATAAACCTTTCATTTAAAGCCATAAAATATGGAAGCAGGTCTGGTGTGAAGCTTCTCCAGGGGCTGATGGGGGGATGCAGAAATGGCAGAACTGCgatccagaaaaagagaaggagagaagaagaaagaagatgCTGCATCTGAAGTAGACCAACAAAACCACAATGGTGTAGCTGATGATTTCTCAAGAGATGAGGACCATCCCAATGGAGTTGAAGATGCCGAGCCCATTATTACAATGgagaagacacacacagacagtggtAGCACTATAACTGAGGAGTCCGGATCAGGTGCTGGAAATGTGGACGGTGCCTCACCCACAGGGACAGAGGAGGAAAAAGTGCAGACCACAGGCTCAGCCAAGAGCGcaatgaaaaacagcaaaactgtACTTCTTCAGCGGATAGTGAAGGTGTTCATCGGTTGCCTCGCTGCAGTCACCTGTGGGATGATGTATGCAGTTTATCTGTCTACATACCACGAGAGAAAGTTCTGGTTCTCCAGCAGACAGGAGATGGAGAGGGAGATTACCTTCCAGGGCGGCAGCGGgctttattattactactataaaCACATGCTCTTCGCTTCATCATTTGAGAGGGGTGTATATGAGCTTACACGGGATAACAGGACGGTTTCTGGTCAGACCATAAATGCAGTTGAGCAGCTTTCACTCTACCCAGAACTCCTAAGCAGCCTGCTCTACAGACTCATTGGCAGCCAGAATGCCATCGAGCCAGTGTATTTCTACATAGGGGTGGTGTTTGGCCTGCAGGCAGTGTATGTGACTGCTCTGTTCATCTGCAGCTGGGTGATGAGTGGCACCTGGGTGGCGGGTATGCTCACAGTAGCCTGGTACATCATCAACAGGCCGGACACGACTAAAGTGGATTATGCAATCCCTCTGCGGGACAACTGGGCCCTCCCTTACTTCTCCTGCCAAGTGGCCGCTCTGACCGGCTTTCTGAGCAACAGCATCAGCTCTGCTACAGAGatgttctgtTACCTGCTGATGAGTGTGACCACGTTCAGCTTCATCGTGATGTGGGAGCACAGCCACTATGTGCTGTTTGTACAGGGAGTCGCACTGTTACTGCTGGACTGCTTCGACCTTGTTCCACCTCgcaagACAGCAGACATTCATAAGGTGTACCTGAGCTCCTTGTTACTGGCCTATGTTCTGCAATATCAGAGGCCCAGTCTGCTCTCCTGCCCCCTGCTCAGCCTGCTTATAGCCAGCCTGCTGGCCAGGTACCTGCAGCAAAACATGAAAATGGGCCCCCTGGTGGCGAGACTAATGAAGATTGTGCTGCATCTATACCTGGTCTTCACCACAGGCATCACTTTTAACTACCTAGTTAAGAAAATTCTTCCAACAAATCAGAATGACTTCATACTGAAGTTTCTGGAGGTCAAGTTTGGACTGAATACAACAACGGAGTTCATCCCGAACCTGCTGTTGTGTGAGGAGGGTTTTCAGTCCCCAGGACAGGATTTCTTCCTGCGCCTCACCCAGGCCTCCGTCCTGCCTTTCTATGTCCTGGTGCTTTTAGTGTGCCTCATCTCAACCATGCAGACCATCTACAGGAGACTCAGTGGTGAGCGGTTAAAGGGCAGCGTGCGGATGGAGGACGGGCGAATAGGAGAACGCCCAGAAGTGATCTACCATGTTCTCCACACGCTGCTGTTCGGAGCTCTCGCCATGATGTTCCAGGGGACGAAGTACCTTTGGACGCCGTACGTGTGTGCCTTCACTGCATTTGGTGTGTGTTCTCCAGAGCTCTGGATGACTGTGTTCAGATGGATCAGGCTGAGGTCTGTTCATCCTGTAGTGCTGGCACTAATACTGAGCACAGCTGTACCGACTATCATTGGCTTCAGCCTGTGGAGAGAGtatttcCCGCGTGTGCTGTCTGAGCTGACGGAGGTGCAGGAGTTTTATGATCCAGACACTGTGGAGCTGATGAACTGGATTAAAAGTCAGGCTCCTCTGGCAGCAGTGTTTGCTGGTAGTCCTGCACTGCTGGGCACAGTCAAACTCTGCACAGGGTGGCCAGTCACCAGCCTGCCTCTATATACAGACCTCAACCTGCTGCAGAGGAGTGAGAGTacGTATCAGGTGTATGCTATGCGCTCTGCTGAGGAAGTGTACAAGCTGTTGACTGCTCAGAAGAGCAGCTACATTATTATAGAAGAGGAGCTGTGTAATGAGATGAGTCCCGTTAGAGGCTGCAGGATCAAAGACCTGCTTGACTACGCCAATGGCCATATGGTGTATGATCAAGGTGAAATGTACACTTTTTCCAAGCATGGCCGATTCTGTCACGAGATCAAAATGAACTACTCCCCGTACACCAACTACTTCACTCGAGTGTTCTGGAACCGCTCGTACCATGTCTACCGAGTCAACTCTGTCATTTCCTTCCAGTACTGAGGACTGCTGCTTCCCCATTGCTCCTCTTCTTTCTCCCTGTTTTACTTTCACTCCATGATGAGCTCTGAGTTACTGGAACTCCAGATTCCTGGAGTCTGGGATGAGAAATCCCACACAAGACtttttaaatggattttaaGGTTGCCTCAGATTTCAGTTCTGCACAATGACTTTTGGTGCTGTGATGTGTGAATGTGAAGGAGTGTGTTGAAGGAtggttctgtgtgtgtgcgtgtgtgtgtgcgtgcgttagtgcgtgcgtgcgtgcgtgtgtgctcACTTTCGGTCTGTAGTCCTTTTGAACCGTTTCATGGCCTGGGTCCAGATTCACAAAGTAAAAGCTGATAATGGCCCTCTTTCCCAATAGAAGCTCATTCCTGCTAcctaacaaaataataatcatcCAGCgcattgtgtttattattattaagtaaactgctatctcaatattttgaca
>XM_022671985.1
gatccagaaaaagagaaggagagaagaagaaagaagatgCTGCATCTGAAGTAGACCAACAAAACCACAATGGTGTAGCTGGTAAGTAAGATGATTTCTCAAGAGATGAGGACCATCCCAATGGAGTTGAAGATGCCGAGCCCATTATTACAATGgagaagacacacacagacagtggtAGCACTATAACTGAGGAGTCCGGATCAGGTGCTGGAAATGTGGACGGTGCCTCACCCACAGGGACAGAGGAGGAAAAAGTGCAGACCACAGGCTCAGCCAAGAGCGcaatgaaaaacagcaaaactgtACTTCTTCAGCGGATAGTGAAGGTGTTCATCGGTTGCCTCGCTGCAGTCACCTGTGGGATGATGTATGCAGTTTATCTGTCTACATACCACGAGAGAAAGTTCTGGTTCTCCAGCAGACAGGAGATGGAGAGGGAGATTACCTTCCAGGGCGGCAGCGGgctttattattactactataaaCACATGCTCTTCGCTTCATCATTTGAGAGGGGTGTATATGAGCTTACACGGGATAACAGGACGGTTTCTGGTCAGACCATAAATGCAGTTGAGCAGCTTTCACTCTACCCAGAACTCCTAAGCAGCCTGCTCTACAGACTCATTGGCAGCCAGAATGCCATCGAGCCAGTGTATTTCTACATAGGGGTGGTGTTTGGCCTGCAGGCAGTGTATGTGACTGCTCTGTTCATCTGCAGCTGGGTGATGAGTGGCACCTGGGTGGCGGGTATGCTCACAGTAGCCTGGTACATCATCAACAGGCCGGACACGACTAAAGTGGATTATGCAATCCCTCTGCGGGACAACTGGGCCCTCCCTTACTTCTCCTGCCAAGTGGCCGCTCTGACCGGCTTTCTGAGCAACAGCATCAGCTCTGCTACAGAGatgttctgtTACCTGCTGATGAGTGTGACCACGTTCAGCTTCATCGTGATGTGGGAGCACAGCCACTATGTGCTGTTTGTACAGGGAGTCGCACTGTTACTGCTGGACTGCTTCGACCTTGTTCCACCTCgcaagACAGCAGACATTCATAAGGTGTACCTGAGCTCCTTGTTACTGGCCTATGTTCTGCAATATCAGAGGCCCAGTCTGCTCTCCTGCCCCCTGCTCAGCCTGCTTATAGCCAGCCTGCTGGCCAGGTACCTGCAGCAAAACATGAAAATGGGCCCCCTGGTGGCGAGACTAATGAAGATTGTGCTGCATCTATACCTGGTCTTCACCACAGGCATCACTTTTAACTACCTAGTTAAGAAAATTCTTCCAACAAATCAGAATGACTTCATACTGAAGTTTCTGGAGGTCAAGTTTGGACTGAATACAACAACGGAGTTCATCCCGAACCTGCTGTTGTGTGAGGAGGGTTTTCAGTCCCCAGGACAGGATTTCTTCCTGCGCCTCACCCAGGCCTCCGTCCTGCCTTTCTATGTCCTGGTGCTTTTAGTGTGCCTCATCTCAACCATGCAGACCATCTACAGGAGACTCAGTGGTGAGCGGTTAAAGGGCAGCGTGCGGATGGAGGACGGGCGAATAGGAGAACGCCCAGAAGTGATCTACCATGTTCTCCACACGCTGCTGTTCGGAGCTCTCGCCATGATGTTCCAGGGGACGAAGTACCTTTGGACGCCGTACGTGTGTGCCTTCACTGCATTTGGTGTGTGTTCTCCAGAGCTCTGGATGACTGTGTTCAGATGGATCAGGCTGAGGTCTGTTCATCCTGTAGTGCTGGCACTAATACTGAGCACAGCTGTACCGACTATCATTGGCTTCAGCCTGTGGAGAGAGtatttcCCGCGTGTGCTGTCTGAGCTGACGGAGGTGCAGGAGTTTTATGATCCAGACACTGTGGAGCTGATGAACTGGATTAAAAGTCAGGCTCCTCTGGCAGCAGTGTTTGCTGGTAGTCCTGCACTGCTGGGCACAGTCAAACTCTGCACAGGGTGGCCAGTCACCAGCCTGCCTCTATATACAGACCTCAACCTGCTGCAGAGGAGTGAGAGTacGTATCAGGTGTATGCTATGCGCTCTGCTGAGGAAGTGTACAAGCTGTTGACTGCTCAGAAGAGCAGCTACATTATTATAGAAGAGGAGCTGTGTAATGAGATGAGTCCCGTTAGAGGCTGCAGGATCAAAGACCTGCTTGACTACGCCAATGGCCATATGGTGTATGATCAAGGTGAAATGTACACTTTTTCCAAGCATGGCCGATTCTGTCACGAGATCAAAATGAACTACTCCCCGTACACCAACTACTTCACTCGAGTGTTCTGGAACCGCTCGTACCATGTCTACCGAGTCAACTCTGTCATTTCCTTCCAGTACTGAGGACTGCTGCTTCCCCATTGCTCCTCTTCTTTCTCCCTGTTTTACTTTCACTCCATGATGAGCTCTGAGTTACTGGAACTCCAGATTCCTGGAGTCTGGGATGAGAAATCCCACACAAGACtttttaaatggattttaaGGTTGCCTCAGATTTCAGTTCTGCACAATGACTTTTGGTGCTGTGATGTGTGAATGTGAAGGAGTGTGTTGAAGGAtggttctgtgtgtgtgcgtgtgtgtgtgcgtgcgttagtgcgtgcgtgcgtgcgtgtgtgctcACTTTCGGTCTGTAGTCCTTTTGAACCGTTTCATGGCCTGGGTCCAGATTCACAAAGTAAAAGCTGATAATGGCCCTCTTTCCCAATAGAAGCTCATTCCTGCTAcctaacaaaataataatcatcCAGCgcattgtgtttattattattaagtaaactgctatctcaatattttgaca

Function

symbol description
dpy19l4 Predicted to enable mannosyltransferase activity. Predicted to be involved in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan. Predicted to be integral component of membrane. Predicted to be active in nuclear inner membrane.

NR:

description
PREDICTED: probable C-mannosyltransferase DPY19L4

GO: NA

KEGG:

id description
K24553 DPY19L; C-mannosyltransferase DPY19L

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671984.1 True 3164 mRNA 0.49 20 4306665 4339082
XM_022671985.1 False 2808 mRNA 0.49 19 4309594 4339082

Neighbor

gene id symbol gene type direction distance location
LOC103045063 LOC108435620 coding upstream 90949 4132022 ~ 4215716 (+)
LOC103042852 LOC108274605,LOC108435589,LOC105028044 coding upstream 200702 3955008 ~ 4105963 (+)
LOC103032643 deptor,LOC108442483,LOC108274614,LOC107685573 coding upstream 371561 3923972 ~ 3935104 (+)
LOC103043978 NA coding upstream 867510 3420240 ~ 3439155 (+)
ndufb9 ndufb9 coding upstream 953070 3347768 ~ 3353595 (+)
LOC103029142 LOC108435612,LOC108274509,LOC107571533,LOC107571277,LOC107730909 coding downstream 518766 4857848 ~ 4884488 (+)
hnrnpr hnrnpr,LOC103029778,LOC105909056 coding downstream 590095 4929177 ~ 4935065 (+)
dnajc8 dnajc8,LOC102775708 coding downstream 604124 4943206 ~ 4954889 (+)
LOC111193076 NA coding downstream 617197 4956279 ~ 4957026 (+)
LOC111193046 NA coding downstream 640385 4979467 ~ 4980022 (+)
G71112 NA non-coding upstream 3855 4302551 ~ 4302810 (+)
G71109 NA non-coding upstream 13209 4293237 ~ 4293456 (+)
G71103 NA non-coding upstream 15830 4290459 ~ 4290835 (+)
G71075 NA non-coding upstream 114009 4189625 ~ 4192656 (+)
G71073 NA non-coding upstream 152436 4151858 ~ 4154229 (+)
G71118 NA non-coding downstream 383 4339465 ~ 4340328 (+)
G71117 NA non-coding downstream 1605 4340687 ~ 4343650 (+)
G71123 NA non-coding downstream 6252 4345334 ~ 4345551 (+)
G71129 NA non-coding downstream 32062 4371144 ~ 4382681 (+)
G71132 NA non-coding downstream 106684 4445766 ~ 4461142 (+)
LOC111193071 NA other upstream 731907 3409670 ~ 3574758 (+)
G70846 NA other upstream 928055 3377684 ~ 3378610 (+)
LOC103024487 syngap1a,LOC108275193,LOC108439800 other upstream 1014190 3121918 ~ 3292475 (+)
G70604 LOC108436838 other upstream 1947436 2358883 ~ 2359229 (+)
lrrtm2 lrrtm2,LOC107680618,LOC107750357,LOC103471148 other upstream 2113106 2088920 ~ 2193559 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other downstream 17983 4357065 ~ 4441931 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other downstream 576731 4915813 ~ 4921820 (+)
G71247 NA other downstream 617216 4956298 ~ 4980011 (+)
G71249 NA other downstream 624620 4963702 ~ 4967907 (+)
G71414 gstp1 other downstream 1160826 5499908 ~ 5505638 (+)

Expression


Co-expression Network