atp10b


Basic Information

Item Value
gene id atp10b
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 5339650 ~ 5408015 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671997.1
AGACCCACGCACACATGTGTTGGGGTGGGCGGGGTGTGTTTGGGGCAGGCCTGTCGGCAGGTAGAGCTACAGGAGCGCTCAACCCCTCGGTATTTGGACTTGTGTAGAAGATGACAGCAGATGGAGTGAAGAGGAGTTTTCAGATTCAGATACAAATAAGGCTAACTAACGTAAACCACTTTGGATAAGAAGAAAATCTGCTTTAACTCGTAAATGGACGTATAACAGAAACCTGAGCCATCATGACCTGGAGAGACTTGTGCTCCTGGACCAGAAGGAGGGATTCAAGCGAATCTGAGAGGAGGCTGGAGTCCAACCTGCCGTATGAAGGCGAGAAGTCCAAGAACCAGCCCAATCGGCATTACGCAGGGAACGCCATCAAGACCACCAAATACACCCTCTGGAACTTTATCCCCAAGAACCTGATTGAACAGTTCCGCCGCGTGGCTAATGCTTACTTCCTAAGCATAGCCATCCTCAACTTCGTCCCATCAGTCAATGCCTTCCAGCCCCAAGTGGCCCTCATCCCCATATGCGTCATCCTCTCACTAACGGCCATTAAAGATGCCTGGGAGGACTTTCGCCGCTACCAGAGTGATCGGAAGCTCAACAGAAGGCCCTGCCTCATATACAGCAGgaGCCAGCAGAGCTTTATGGAGAGGAGGTGGAAGGACGTGAAGGTGGGGGATTTTGTGAGAGTGCTCTCCAATGAGATAATTCCCGCAGACATCCTGCTCCTACACACCTCCGACCCTAATGGAGTGTGCCACATGGAGACGGCCAATCTGGACGGCGAGACTAACCTCAAACAGAGGAGAGTGGTGCCCGGCTTCTGTGATACGAACTCCACATTTGAACCCCAGAACTTCAACAGCATCGTTGTTTGCGAGAAGCCTAACGACAACCTCAACCATTTCAGCGGCTTTTTGGAAAAAGGCAATAAGAAGACAGGTTTTGGCATTGAGAGCCTCCTGCTGCGTGGATGCACTGTCAGAAATACAGCTGATGCCTCAGGAATAGTGGTGTACGCAGGCCACGAGACCAAATCCATGCTGAACAACAACAGGCCGCGGAACAAGCGCAGTAAACTGGAGAGGAAGATGAATATAGAGGTCTTCTTCTGTGTTCTGCTGCTCATCTTCATGTGTCTCATCGGAGCTGTGTgtCATGTGATCTGGTTGGAGTCTTTTTCAACTATCCCAATGTACTTCATCCCAAACAGTGACGGGACGTATACCTCCTCAGCTCTGTCAGGTGTTAACATGTTCTTCACCATGATCATCCTCCTGCAGGTGATCATCCCCATTTCCCTCTACCTGTCGATCGAGCTGGTGAAGATGGGTCAGGTGTACTTCATCACTCAGGATGTGGATCTGTATGATGAGGAGAGGGACATTCGGATGCAGTGTCGTGCTCTCAACATCACAGAGGATCTGGGCCAGATCCAGTACATCTTCTCAGACAAGACCGGGACCCTGACTGAGAACAAAATGGTGTTCCGCCGCTGCACCATAATGGGCACTGAATACCCCCACAGTGAGAACGCCACACGCCTGGCCCTCCTGGCAGGGGAGACAGACGCGGATGAAGAGGTTATTTACCAGCAGAACAGACGGCCGCCTCTTTTCTCTTTGGAGGAGGCCCAGGACGGCCCGGCACGAGCCAGCGCGCGCCTGCCCGGCAACAGCAGCCTTCACAGGTCAAGGGTCACAGCAGGAGCCTCCAGCTGCATGGCCTTCAGCAGCCCAATGGAAACGGAGGTGGTTCCAGATGAGACTCTGCTCCACCTGATGGAGAACGAAGAGGACAAGTCCTACCTGGACTTCTTCCTGGCCATGGCCATCTGCAACACCGTGGTGGTTTCCACCGACACGGCCCGGAGACAAGGGgtCACAGGGCGGCGTAACTCTGCCCTCTCCAGCAATCCTCTGGAGTGTATGGAGGGTCTTTTCAGTCGAGCTACATGCTGTAAAAGGCTCCGCAAGTCTTTAGAGAAACTCACGTGCAGGAGAGACTCTCACGCTGAGCCTTTTGACATGGGCCAGACATCCTTCTATGATGTCTCTGCTTTCACCAACTCTGTGGAGGGCTTTGATGAGGATGAAAATGCACCCGGCCACCGCAGCAATGTGAACAGAAGACCCCGGACTGGAAGCAGCCCTGCTGCACCACTGGAAGTGTGTTACGAGGCCGAGAGCCCAGACGAGGCTGCTCTGGTCCACGCGGCCAAGGCCTACGGCTTCACCCTGCTGGAGCGAACCCCTGATCACGTGACCGTCCGACTGCCTCACGGGAAGGAGCTGAAGTTCAAGGTGCTGGACGTTTTGAATTTTGACCCAGTCCGGAGGAGGATGTCCATAATAGTACGCCATCCTCGCACCAGGGAGATTATCATGTATACAAAGGGAGCAGACTCTGGAATCATGGAGCGTCTGCACAAGTCCTTTGAAGACCCTCGAAAAGCTGCGACTGAGAGCACAAATGTTGCTGCTGAAACCCAAGGAGATCTAGACATGTATGCAAGAGATGGCTTAAGGACCTTGTGCTTTGCTAAAAAGgtggTGAATGAGCAGACCTATTCAGCCTGGTCAATTAGGAGACAGGAGGCCCTGGCAGCTATAAGCAGGAAAAAGGAGCTGCTCATGGACACTGCAGCAGATATGGAGAATAACCTGACACTGCTGGGGGCCACTGGTATTGAAGATCGCCTTCAGGAGAACGTTCCGGAAACCATCAGGGCCTTGAGAGAAGCAGGCATTCAAGTATGGGTCCTGACTGGAGACAAACTAGAGACAGCCGTCAATATCGCGTACTCCTGCATGCTGCTGGACCACAGGGACCTGGTGTTTACCTTCAACACAGAGAGCAAGgaGGTATGCAGTACCATGTTGACTGGGATTCTGGAGGACATCCTGCAGCATGAGAAGCAGGAGAGGGAGTTCAGCATCGGGCTGGTGATAGACGGACGCACCCTGTCTCTGCTCCTGGACGATGACCTGCAGACGCAGTTCGTGGAGCTGTGCAGTCACTGCCGCTCTGTGCTGTGCTGCAGGGCCACTCCTCTGCAGAAGAGCAGGGTCGTCACGCTGATGCGTCACAGGCTCAAGGTCATGACTCTTGCTATAGGTGATGGTGCCAATGATGTAAACATGATTCAGGCAGCAGATGTGGGCGTGGGAATATCTGGGCAGGAAGGGATGCAGGCTGTCATGGCCAGCGACTTTTCAATATCTCGCTTCAAACACCTGAAGAAGCTCCTGTTGGTTCACGGTCACTGGTGCTCCACACGGCTGGCAAACATGATCGTCTACTTCTTCTATAAGAATGTGGCCTACGTCAACCTCCTCTTCTGGTACCAGTTGTTCTGCGGCTTCACCGGCACGGCCATGATTGACTACTGGTTTATGATCTTCTTCAACCTCCTGTTCACCTCCGCTCCGCCCATCATGTTTGGCATCATGGACCGGGAGATTTCGGCCTTCATGCTGCTGCAGCTTCCACAGCTCTATAAGAGGGGTCAGCAGACTGGGGGATACCGGCGCTCTACTTTCTGGATCGGGATCCTCGATGCCTTTTATCagagctttatctgtttttttattccataCTGGGCGTATGAAGGCTCTGATGTTGACATCTTCACTTTGGGAATTCCCATGAACACAGTCTCTCTCTTCACCATCATCCTTCATCTGGCGATCGAGATCAAGAGTTGGACGGTGGTGCACTGGGTGATCATGGTGGGAAGTGTGCTGGTCTACTTTATCGTGAGTCTGGCCTTCAGCGCCCTCTGCATCAGCTGCAACCCTCCGTCCGATCCATACTGGCTCATGCAGCAGCAAATGGCTGATCCCATCTTCTACCTGATCTGCATTTTAACCACCGTCGTAGCTCTGCTGCCAAGGTACTTCCTACATGCTTTGAGGGGGACATTAATGCCATCTGATCACCTCAAGGCGAGGCAGATAGACCAGCTGCCTCCACACCGCCGCGACCAGTTTCTCAGAGAGTGGAGAAACCTCCAAGAACTGTGTGCCTCGTTCCCCAGTGTGTCCCAATCTACTCACAGCACCATCAACACCCCAGACATCTAACAGGCCTGAAGCACTGCAATGTTGAACTGGAGCGGATGGGCAGCTTTTAACAGATGTTTGGTGGGATTTCTTGGGGCACGGTGCAACGGAACATTATGTTTTGGTGTGAGGGAAACTTGAAACTGATTTGCACACCAGCTATTTGCACACTACCGATTTGCACATGTGCCATATTTGAGGGAGATTCTACTGAAAAGTGTAATATGTACtaaaatgtactattttaaCTGTTCTGTGTAAACAGAGACATTGCTGCGTCGTTAAACGTCACATGATGTCAGTTCAGCTGAGTGGAGGTACACGCAGAACAGCTCGAAGCCGTTTGTTTGCAGCAGAATTCTGAATGTGCTTCCTTCAGCCTCTTCTCTTCCAACAAGCCTCATGGATAAACGCAGAAAGCTGATCCAAACCATGTCCCTAAGGTTTTTCAAGGCTCCAGGCAAAAGTTCAGACTATTAGGTGGCACAAGCTGCGCTTGGCTAATCGATACATCTCCCACAGTTTCTCACCAAAAAGGCTGCCGCTGCCTCTCCGGACTGACTGGGTGCTTCAGTAGCGCTCGCATCCCAGCGAGAAACCTACTTTCCCCTCGTCATGCAGGGCGCATTTGTATTCACGAGCGCTTCGAGCTGCTCATGAAATAATTGAGGTTTGCAGATGTTACGTAATATCCTGGTATTTTCAGTTCATGCATCCGTATTGAGAGCATGTTGGGCTtgatggagagagacagaaacacaaGCACTGCAGGAAGATTTAAGAGCATCTCTGGCTTTGTTATTACTCGTAattcttaattatttaaaacgAGACTTGAACAGACTGcttgtgtttgcgtgtgtgtgtgtgtgtgtgtgtggaagagaaagagagtgtgtgtaaaaatAATCTGCCGAAGCAGAGGACACACGTctacccccccacccccttgtATTTGAATACTTAATTGTATCTCTGACGTCCTTCTGACGTTCCTCACTCTTGAAGGGGTCAGTGATGATCCCACTTGTATGGCCAGGCAAGCCGATGAAGCCCAGGGAGTATTTCACTTTTCCATCCACGTCTCGCTTAAGGGTCCTCTGTAGCTGAAGCTTGCAATAAAAATGGGTCTAGCACTGATTCGATTTGGAGAGCTCGttgcatttttatgtaatgATGTCACAGCCCTTATCAGTGGGCCAGCTCTGCCATCTTGTGGTGGATCCTGGAACGGCTCGGACGTGCTCgtgagagagacaggaggaAGAGAACAAGATGGATGATGTTTCAATGTCAAAAGAACAGCTTTGTGCATTTTTATGCTACACTGTTATCTGGCTGTGGGCAGGGTTTGGCTGAGCTcgtcaaatcaataaaattcaTTAAATGATCA

Function

NR:

description
putative phospholipid-transporting ATPase VB, partial

GO: NA

KEGG:

id description
K01530 E7.6.2.1; phospholipid-translocating ATPase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671997.1 True 5466 mRNA 0.51 21 5339650 5408015

Neighbor

gene id symbol gene type direction distance location
gabrb2 gabrb2,LOC107554707,LOC107684828 coding upstream 25992 5182503 ~ 5313658 (+)
gabra6 gabra6,gabra6a,LOC107554706,LOC108275227,LOC107737791,LOC107684829 coding upstream 166394 5143765 ~ 5173256 (+)
ccng1 ccng1,LOC107745080 coding upstream 209093 5123954 ~ 5130557 (+)
LOC103040455 sept8,LOC108435605,LOC103023804 coding upstream 221811 5091878 ~ 5117839 (+)
LOC103041177 sfxn1,LOC108435595,LOC108275306,LOC107668583,LOC107749734 coding upstream 257044 5068901 ~ 5082606 (+)
atp7a atp7a,LOC101485317 coding downstream 22674 5430689 ~ 5476431 (+)
LOC103038898 NA coding downstream 72373 5480388 ~ 5485164 (+)
LOC103044251 NA coding downstream 83407 5491422 ~ 5494564 (+)
LOC103037091 NA coding downstream 288904 5696919 ~ 5731315 (+)
tmem173 NA coding downstream 554265 5962280 ~ 5987766 (+)
G71397 NA non-coding upstream 14763 5323669 ~ 5324887 (+)
G71304 NA non-coding upstream 41329 5295678 ~ 5298321 (+)
G71294 NA non-coding upstream 132573 5205216 ~ 5207077 (+)
G71287 nudcd2 non-coding upstream 202083 5133735 ~ 5137567 (+)
G71260 NA non-coding upstream 295892 5001091 ~ 5043758 (+)
G71411 NA non-coding downstream 1016 5409031 ~ 5410313 (+)
G71473 NA non-coding downstream 119981 5527996 ~ 5532969 (+)
G71474 NA non-coding downstream 120440 5528455 ~ 5532295 (+)
G71489 NA non-coding downstream 195105 5603120 ~ 5603321 (+)
G71490 NA non-coding downstream 199703 5607718 ~ 5607946 (+)
G71247 NA other upstream 359639 4956298 ~ 4980011 (+)
G71249 NA other upstream 371743 4963702 ~ 4967907 (+)
atpif1 atpif1,LOC105912502,LOC107571275,LOC104922170,LOC107730904,LOC103378180 other upstream 417830 4915813 ~ 4921820 (+)
LOC103028288 LOC108435610,LOC108275213,LOC106520856 other upstream 897719 4357065 ~ 4441931 (+)
LOC111193071 NA other upstream 1764892 3409670 ~ 3574758 (+)
G71414 gstp1 other downstream 91893 5499908 ~ 5505638 (+)
LOC103037414 NA other downstream 264703 5672718 ~ 5678874 (+)
LOC103043949 ppp3cb,LOC108274683,LOC107660165,LOC107758531,LOC107680292,LOC107589094 other downstream 463075 5871090 ~ 5957019 (+)
G71682 LOC108430946,LOC108416517 other downstream 1117626 6525641 ~ 6538794 (+)
G71788 LOC105418110,LOC105418502,LOC106676625,LOC102305489,LOC102201812 other downstream 1473572 6881587 ~ 6885541 (+)

Expression


Co-expression Network