CI01000009_06250463_06251001


Basic Information

Item Value
gene id CI01000009_06250463_06251001
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 6250286 ~ 6251001 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_06250463_06251001.mRNA
ATGGCTTTGGTAGGACTTTTTGAAAAAGGTGATATAAATGAGTCGGTTGAATATATGAAATATGTTGAGGAACTCCTGGGCTTGTGTAATAAGAGTGCATTGGTATTAAATGTAAATAAAAACACAGAATTAGTTATCAGTCGCACTAGGCAAGATGTTGCAGTTGTGCCTGTAATGATAGAGAGTCACCCTGTTGAGATTGTTGATCATTTTAAATATCTTGGCACATATATAGATAGTAAACTGAGTTTTGTGGATAACACTAATAATATTTTGAAAAAATGTATGCAACGTCTATTCCTAATACGGAGAATCAGTAGGTTTGGACTAAGTCAAAACATATTGGAGATTGCCTACAAATCATTGGTAGAGAATGTGCTGACCTATAATTTAACCTCATGGTATGGGCATCTTAACTTTTGTTTTATTGCCCTCAGGGAGACGATTTTTAATGCCTAGAGTAAAGACTAATATTTATAAAAGGTCTTTTGTACCTGCTGCGATAGGATTTATTCATCAAAAAGCTATGTGATTCAGTATGATGGTTTTTTATGTGTTTTGTAGTATGTGTCTGTATGTGTATTTGGTTTTCGCTGGTGTGGTCAAAGAAAAATTTTAACCATAGTTGACAATAAA

Function

NR:

description
orf2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_06250463_06251001.mRNA True 636 mRNA 0.33 2 6250286 6251001

Neighbor

gene id symbol gene type direction distance location
CI01000009_06246303_06248176 SLC10A2 coding downstream 2110 6245570 ~ 6248176 (-)
CI01000009_06237366_06242607 NA coding downstream 7659 6237158 ~ 6242627 (-)
CI01000009_06228655_06235149 NA coding downstream 13669 6227678 ~ 6236617 (-)
CI01000009_06214501_06218695 TLR20.2, TLR20F coding downstream 31454 6214295 ~ 6218832 (-)
CI01000009_06124385_06127298 NA coding downstream 121708 6123786 ~ 6128578 (-)
CI01000009_06253421_06255264 NA coding upstream 2420 6253421 ~ 6255946 (-)
CI01000009_06891877_06908223 EFNB2A, EFNB2 coding upstream 640240 6891241 ~ 6908223 (-)
CI01000009_06913437_06917631 NA coding upstream 661469 6912470 ~ 6917631 (-)
CI01000009_07020336_07047155 NA coding upstream 769314 7020315 ~ 7048177 (-)
CI01000009_07064060_07084764 ZEB2A coding upstream 812796 7063797 ~ 7085218 (-)
G54137 NA non-coding downstream 45487 6204411 ~ 6204799 (-)
CI01000009_06046712_06060022 NA non-coding downstream 186031 6045874 ~ 6060442 (-)
G54077 NA non-coding downstream 208619 6041458 ~ 6041667 (-)
G54068 NA non-coding downstream 227459 6022613 ~ 6022827 (-)
G54065 NA non-coding downstream 230930 6019046 ~ 6019356 (-)
G54156 NA non-coding upstream 214973 6465974 ~ 6530279 (-)
G54387 NA non-coding upstream 284093 6535094 ~ 6535317 (-)
G54411 NA non-coding upstream 318624 6569625 ~ 6569834 (-)
G54417 NA non-coding upstream 322909 6573910 ~ 6574168 (-)
G54488 NA non-coding upstream 381800 6632801 ~ 6633000 (-)
G53515 NA other downstream 745038 5502395 ~ 5505248 (-)
G52828 NA other downstream 2018817 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 2988329 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 3350879 2883688 ~ 2893975 (-)
G52410 NA other downstream 3687753 2551724 ~ 2562533 (-)
G55814 NA other upstream 2174820 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 2607151 8856310 ~ 8860563 (-)
G59097 NA other upstream 6037216 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 7724387 13975099 ~ 13978614 (-)
G59490 NA other upstream 7782563 14033564 ~ 14037873 (-)

Expression


Co-expression Network