mfsd7 (mfsd7)


Basic Information

Item Value
gene id mfsd7
gene name mfsd7
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 9252866 ~ 9276501 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672091.1
TGTTTTGtgctctctatttctctctttcttctttctcagCCGGAGAGACAGAGTGCGGCTTAGCTCGGATCAGATCAAGCACTGGCGATTAATCGCAGCTACACTGTACTGAGTACTGAACCCGAGTACCGCGAGAGTGATTCGGAGAGTCGACTCGCCATGAACCGGCCGGGCACGAGGCTCTGTGGAGTGCGGGAGCTGTGAGCGGTTAGTAATGCTTCCTCCTGCGGGATAGACCTGTCTGTGGACCTGCTCGTGGACCTGCTCTCTGCGCCTCCAGCCTGACTCATGGATAATGGAGCGCTCCACACCCAGAACCGAGCAGAGCGCAGTCCGGCTCTGAGGAAAGCCGGCGAGTTCAGATCGTACAGGAGGAGATGGTTCATCCTGAGTGTCGCGTGCCTCCTCAACTGCTCCAACTCTATGCAATGGCTGACCTTTGCTCCTGTGGCGGATCTGACAGCAGAGGGCCTGCATGTGTCTCTGGACCAGGTCAACTGGCTCTCACTCGTCTATATGGTGGTGGCCATTCCTCTCAGCCTCATATCAACATGGATGCTGGATACACTGGGACTGAGACTGACTCTGATCTTGGGGTCCTGGCTCAACATGGTTGGCAGTGTAATGAGAGTGGTGGGAGTTCTCAGCTTTGTCCCAGGGTGGGCCCTGTTCCCAGTGGTGATGGCGGGGCAGACTCTGGGGGCTGTGGCTCAGCCTCTGGTGATCTTCTCCCCCACCAAACTGGCAGCACTTTGGTTTCCTGACAATCAGCGTGCTACTGCTAACATGATCGCCTCAATGTcaAATCCCCTTGGCCTGCTGTTTGCTAACATCCTCTCTCCGCTCATCATCAGTAAGACCAGCAATCTTTTTATACTGCTCCTTACATACGCTATACCTGCCATCGTGGTCTGTTTCCTAGCAACAGTGGGCATCCGGGAGAGTGTGCCCCCTACGCCCCCCTCAGCTGGTGCAGAGACCTCCAGCTCGGAGCCTTTCTTCCAGGGCATTAAACTGTTGATGAAGAACAAGGCCTATCTAATCCTGCTGGTGTGTTTCGGCTCAGGCATCGCCATCTTCACCTGCTTCTTCACTCTGCTGGAGCAGATCCTGTGTATTAAAGGCTACACCAATGattttgctggagtgtgtggagcTCTCTTCATCGTGTTTGGGGTGATCGGTGCTGCCTTTCTAGGCCTTTTCGTGGACAAGACAAAGAAGTTTACAGAGGCCACCAAGATAAACATATGCCTTACATCTCTGGCCTGCACTGCATTTGCTGTGGTTACTCAGATGAGGGATCAGAAAGCTCTGATTGGTGTAGTTTGTGCTCTTTTTGGCTTATTTGGATTCTCCATCTATCCGGTTTCGATGGAGCTGTCGGTAGAGTGCTCCTATCCAGTCGGAGAGGCAACGTCAGCTGGTCTCATCTTTATTTCAGGGCAGATCCAGTCTATTATCTACACTGAGATCTTGCAAGCTCTGACCAAGAAGCTGGCAGACTCTCCTGGCTCCATGTGTGCTGCTGGTGGCGATGACAACTTGAGCTGGAAGG
>XM_022672092.1
GAGTTTTACAGGGGAGGTCATCTGCCCCATTCACCTCACTGTGGTCAATCTAAAGAGGAGAGAGGGGGGTCGCTCTGGGAGCCGGAGAGACAGAGTGCGGCTTAGCTCGGATCAGATCAAGCACTGGCGATTAATCGCAGCTACACTGTACTGAGTACTGAACCCGAGTACCGCGAGAGTGATTCGGAGAGTCGACTCGCCATGAACCGGCCGGGCACGAGGCTCTGTGGAGTGCGGGAGCTGTGAGCGGTTAGTAATGCTTCCTCCTGCGGGATAGACCTGTCTGTGGACCTGCTCGTGGACCTGCTCTCTGCGCCTCCAGCCTGACTCATGGATAATGGAGCGCTCCACACCCAGAACCGAGCAGAGCGCAGTCCGGCTCTGAGGAAAGCCGGCGAGTTCAGATCGTACAGGAGGAGATGGTTCATCCTGAGTGTCGCGTGCCTCCTCAACTGCTCCAACTCTATGCAATGGCTGACCTTTGCTCCTGTGGCGGATCTGACAGCAGAGGGCCTGCATGTGTCTCTGGACCAGGTCAACTGGCTCTCACTCGTCTATATGGTGGTGGCCATTCCTCTCAGCCTCATATCAACATGGATGCTGGATACACTGGGACTGAGACTGACTCTGATCTTGGGGTCCTGGCTCAACATGGTTGGCAGTGTAATGAGAGTGGTGGGAGTTCTCAGCTTTGTCCCAGGGTGGGCCCTGTTCCCAGTGGTGATGGCGGGGCAGACTCTGGGGGCTGTGGCTCAGCCTCTGGTGATCTTCTCCCCCACCAAACTGGCAGCACTTTGGTTTCCTGACAATCAGCGTGCTACTGCTAACATGATCGCCTCAATGTcaAATCCCCTTGGCCTGCTGTTTGCTAACATCCTCTCTCCGCTCATCATCAGTAAGACCAGCAATCTTTTTATACTGCTCCTTACATACGCTATACCTGCCATCGTGGTCTGTTTCCTAGCAACAGTGGGCATCCGGGAGAGTGTGCCCCCTACGCCCCCCTCAGCTGGTGCAGAGACCTCCAGCTCGGAGCCTTTCTTCCAGGGCATTAAACTGTTGATGAAGAACAAGGCCTATCTAATCCTGCTGGTGTGTTTCGGCTCAGGCATCGCCATCTTCACCTGCTTCTTCACTCTGCTGGAGCAGATCCTGTGTATTAAAGGCTACACCAATGattttgctggagtgtgtggagcTCTCTTCATCGTGTTTGGGGTGATCGGTGCTGCCTTTCTAGGCCTTTTCGTGGACAAGACAAAGAAGTTTACAGAGGCCACCAAGATAAACATATGCCTTACATCTCTGGCCTGCACTGCATTTGCTGTGGTTACTCAGATGAGGGATCAGAAAGCTCTGATTGGTGTAGTTTGTGCTCTTTTTGGCTTATTTGGATTCTCCATCTATCCGGTTTCGATGGAGCTGTCGGTAGAGTGCTCCTATCCAGTCGGAGAGGCAACGTCAGCTGGTCTCATCTTTATTTCAGGGCAGATCCAGTCTATTATCTACACTGAGATCTTGCAAGCTCTGACCAAGAAGCTGGCAGACTCTCCTGGCTCCATGTGTGCTGCTGGTGGCGATGACAACTTGAGCTGGAAGG

Function

NR:

description
PREDICTED: major facilitator superfamily domain-containing protein 7

GO: NA

KEGG:

id description
K12306 MSFD7, SLC49A4; MFS transporter, FLVCR family, MFS-domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672091.1 False 1558 mRNA 0.53 9 9252866 9268345
XM_022672092.1 True 1600 mRNA 0.54 10 9252866 9276501

Neighbor

gene id symbol gene type direction distance location
LOC103029481 fgf18a,LOC103029481,LOC108430953,LOC108274431,LOC107747128,LOC107660900,LOC107754488,LOC105893086 coding downstream 494738 8735077 ~ 8758128 (-)
enox2 enox2 coding downstream 1077972 7867201 ~ 8174894 (-)
med12 med12,LOC106604460 coding downstream 1484505 7726618 ~ 7768361 (-)
LOC103025952 hspa4,LOC108430974,LOC108274676,LOC100380717 coding downstream 1533810 7699890 ~ 7719056 (-)
LOC103026262 gnpi1,gnpda1,LOC103026262,LOC108430975,LOC107741117,LOC107664733,LOC107554697,LOC104938351 coding downstream 1555958 7690185 ~ 7696908 (-)
cplx1 cplx1,LOC107751330,LOC107697630,LOC107660193,LOC107587069 coding upstream 268437 9544938 ~ 9625510 (-)
LOC103036760 LOC108442475,LOC108275030 coding upstream 682019 9958520 ~ 9965719 (-)
phrf1 NA coding upstream 796728 10073229 ~ 10093613 (-)
lrrc56 NA coding upstream 889826 10166327 ~ 10184846 (-)
LOC103047177 ldha,LOC103047177,LOC108442466,LOC107558315,LOC107707550 coding upstream 946617 10223118 ~ 10233197 (-)
LOC111193091 NA non-coding downstream 56411 9195989 ~ 9196455 (-)
G72447 pcdh2g20,LOC100536800,LOC108192077,LOC107588304,LOC107747110,LOC107655636,LOC107655635 non-coding downstream 87580 9158468 ~ 9165286 (-)
G72446 pcdh2g20,LOC108192077,LOC107655635,LOC107588304,LOC108438834,LOC100536800 non-coding downstream 93952 9149126 ~ 9158914 (-)
G72443 LOC108438833,LOC108438834,LOC108438829,LOC107596372 non-coding downstream 94744 9142470 ~ 9158122 (-)
G72437 LOC107655635,LOC108438829,LOC107754498,LOC108438834,LOC107747110,LOC107754548,LOC108438831,LOC108274935,LOC107655634 non-coding downstream 109459 9122644 ~ 9143407 (-)
G72482 NA non-coding upstream 306848 9583349 ~ 9583897 (-)
G72483 NA non-coding upstream 326774 9603275 ~ 9605540 (-)
G72497 NA non-coding upstream 430881 9707382 ~ 9709185 (-)
G72508 NA non-coding upstream 473949 9750450 ~ 9750692 (-)
G72524 NA non-coding upstream 506819 9783320 ~ 9783821 (-)
G72453 NA other downstream 27307 9188399 ~ 9225559 (-)
G72449 pcdh2g29,LOC108438834,LOC108438829,LOC108274931,LOC108438833 other downstream 78557 9165878 ~ 9174309 (-)
G72336 NA other downstream 607265 8639538 ~ 8645601 (-)
LOC103030515 wu:fb13g09,LOC108441781,LOC108274673,LOC107554714,LOC107716370,LOC107677527 other downstream 1410586 7773895 ~ 7842280 (-)
LOC103027657 LOC108430978 other downstream 1662312 7551185 ~ 7590554 (-)
elp1 ikbkap,LOC107751344,LOC106611638,LOC105419749 other upstream 524554 9801055 ~ 9824519 (-)
LOC103042271 LOC108442478,LOC108275244 other upstream 579898 9856399 ~ 9902893 (-)
LOC103037069 LOC103037069,LOC108442462,LOC101069290,LOC107675263,LOC107562830,LOC107707530,LOC107085412,LOC101171241,LOC103151621 other upstream 775451 10051952 ~ 10054034 (-)
LOC103046452 rassf7 other upstream 825272 10101773 ~ 10162484 (-)
LOC111193093 NA other upstream 1948278 11224779 ~ 11225954 (-)

Expression


Co-expression Network