ice2


Basic Information

Item Value
gene id ice2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 16966782 ~ 16988490 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672209.1
CGGGAGCGCCCTCTGATGGTGGAAGAGACACAGGTGAGGTTCTGAAAGTGGGTGTTCTCCTCTCTATTAGAGACTCTCTGTTTGTAGCAGCATGAGGACAGTAGTGGATGTTGGAGCTACTCTGTCAGTTAACCTAGATGCACTATAAAGTCTGAATAAAATCAGTCATGGAGCTGAAATGGGATGATGGTCCAGTCAGTGAACCCGTCCTGTTTTCCAAAGACATCTTTGACAAATACTCACTGGCACCCACAGTACAAGAGCTGTGGGCCTTGTTACAGAGTCCTGACGTGAAAGAAGAAAATACGAGTAGGCCTGTTGGTACCTCCTCGCCACCAAAGCTGACCAAAAGCAATACAGTTGCACCAAAAaccagcagcagaaacagccaTGGCTCGGTTGGCTCTGCTTCAGACCGCAGCGACACTGTTACTGATAGCAAGAATAATCTCACTGATGCTGATTGTAAGGAACCTAAAGGATTCCCTGAACCAGAAGTACCTTATCCCTGCTACACAGCCCTCAGCATCAAACAACGAATAGAATATCTGAACTCAATTAAGAACAAAAAGCATCTCACAACTCCACAAAACATAATGCAGACTGTGCAGATGGAAATTGCAGAGTTCATGAAGTATGTGCAGGATGTCTCCAAATTTCGTGCTGATAAGTACAAATACGTGCCTCTGGGAGCCACTCGCTATTTAGAGGAATATTTTAAAGCCAGCATGGAGTATATAAAATACTATCCGCAGCATTACAGTATCCAGGAAATCACCAGCTTGACTGGAGGGAAATTTATCCCAGACATTTCCCTCAACTTTGAGAAACAACTGCTTGCAATGgGTAGTGTAGACATGTTAGAAAAATGGATCGTGCCAGGAAAACCACAGCTCTCCGTGGATTATGACTCTGTTTCAGCTGTGATTCCTCCGTCGACAAAGGCCAGACATTTTCACAAGGCAATCAGCAGTGACACAAATGCAGAGAAACTCAGTGCTATCTATGAGCCTCATGTGTGTCTAGCAAAGGAAGCCTTCATTCAGCTCCTTAATAACAGTTCTGAGCATTCTGAGCCATGGGAGCTGCCAGTCTGGGTGAAGGAGAAGTCTGGAAAAGGTAGCACTCTAAGTAAAACAGTGTACATCGATCCTCCTCTGCTGAAGACACAGATgacctggagagagagaaatcatcTGTTTCATGAGGAGAGTATAAAACTGGCCTACAAGAAGACAGCCTCAAATCCTGTGTTTTTTCTCGAAACAGAGGACTTTGCCAGTAAAGTAGACTTTGTCCCAGAGGCAAAGAGTAACTCAAGAGCGGTTGTTTCATTTGATGAGACCGGCATCGATTTTGAGGTCGATGTTACAGAACTGGAGTCATTTGGAGAGTCCAGCCAACTTAGTAAGAATGTAAAGGAAGAGGATAAACCAGAAGACCACtttaaacatgaaacactgcCATTATCTAAACCTAAATCAGGCTCAGATAAAACCAGCGAAGTACTCACTAAAGTGGCTTCCACACTAAAAGCCATTTCTCCACCACTCTCCACACCATCAAAGGAAAAACTGCAAGAAGAAACAGTCAGTACTGATGTAGAGGACAGCTCAGTGGACAAGAGATCTGGGGACATTCTATCAGAAGACCAAATGAGTAATAGTTCCACTGTAGAAGAGTCTCCCAGTGCAGACTGTCCACCAAGCAAGCGGATAAAGCACAGCTCAGCAAGCAGTCCAGACCACACTATGGATTCTGACGAGGAACGTCTTGTTATTGATCACTTTGGCTCCCCATTAAAAAACCAAGCAGAGAAAACGAAGACAATTCAAGCTACACCAGAGAACACCACTGAAACCACACTGTCctcattaaacaaacaaacctcAGATTCCACAGTGCTTCCTAGCACCACCAGCCCTGCTAAAGGAAGTAAGAAAGGAGTTAAAAGGTCCAGAGTCTCTGAGGAAGGTGACCAGCTTGGTCAGATCTTGAGAATGCAGAATGCCATGCTGAAATCTAAAGTGGGCAAAGGCCAGGAGACTCCAAAACCACACCCGGAGTGTAGACCTCCCGAGCCCAGGGTGAGCATCCACCATCAGCCTCTGGTTAAACCCTGTGTCTCCTCCTACTTGGACTCTAAAGAAGGTCTGGTTGAAGAGGCTGTAGCTCCTGCTGTCGCTCAGTCCCCACCACGcaagaaaaGGCTGCTGAAAGAGGAGCTGAGGGTGAGTGCGGAGGACGAGCAGGACTACGAGGCTCCGACAGAGGCCAGTGTGTTCTATAAACTCTACAGCCTAATGGATGTGCTGCTGATCGTGCGCAGCACTGTGGACATCGCCCACCCCAGACATGATCAGGACACCTTTAGGGCTGTTCCAGTGCACGTGCTGCCTAAGCTGGAGTACCAGTTGTGTTACGGAGCTGAACTCCTGACCCACACTGAGGTGTGTCGTCTGTGGGCCGAGCAGCTCCTACACACCAGCACTGCCTCCTTCATAGgtcgCATCAATGCACACACATCAAAGGTagcagagctgcaggagctcCCAGCTGATTGGATCCAGAACACTTCCTGTAATTTTAAGCCGGCTAGATGCTTGAATACGCTTCACCACATTCTGAAAAAAGTCACAAGCTTACCGGAGGGGAGGTACCTGTTGGTCCATAAACCCGGTGAAGCGTTCGTGTCCATCTTCAAAGCCAATGATGGAAATAAAACTAGTCGTAGCATCTATGATCTTCAGGCAGTGCACTGTGGCCCCCCTGTCCCTCTGGAGGCCAAGGTGCCCTGGGTTCCTTTAGACCCTTTTCATATACTGCCATTCCACCAGAAATACAAAAGACCACCTTGCACATTTCCACCCTGTCCATATCAAGGAAAAAAGCTGGCAGGAGGGAACAAAGGAGCAAAGCATGCTAACACTCCAAATAATCCACCACGAGGAACTCAGCAGTTTGCAGCCGTGCCCGGGCAAAATcacaagaagaaaaagaacaagaaaaaaaacaaaccaaacaaatggaCAGAGAAGATGAAGAACaaacagaagaaagaaatacagataaaaaaagaagagcagTGAGCAGGGATAGGACTAGGACTCTTGTCTTGAATATGTAGGCAGAACTCAGTGGCGTCAGGAGGTGCTTACGTTAGAGTGGGTCTAATCAGGGAAGGATCGAGGTAGATTATTATTTGAGAAGCTTAGGTTTGAGGACGAGGAGTTTTCCTGAACTGATTTATGTAAGTAAATTCCACGCaaacagtataatttatttttcttatttttttttttgaaaatcctTCTTCAAAGTTAAAAGTTTTGAAATGTATGCAAGCTAGTTGACCTTTGTAATGTTTTGTATTCTTActtttatttgtataataagaatgaataaattagttattgatataaacta

Function

NR:

description
uncharacterized protein LOC110521127, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672209.1 True 3426 mRNA 0.45 15 16966782 16988490

Neighbor

gene id symbol gene type direction distance location
LOC103044821 anxa2,LOC108433632,LOC107739086,LOC107724175,LOC107659511,LOC107550215 coding downstream 1222 16958574 ~ 16965560 (-)
bnip2 bnip2,LOC107703138 coding downstream 136801 16814916 ~ 16829981 (-)
otud7a otud7a,si:dkey-37f18.2,LOC107715690,LOC107752330,LOC107659507,LOC107550219,LOC107698115,LOC107598848,LOC108275340 coding downstream 228117 16618151 ~ 16738665 (-)
LOC103042575 LOC108433637 coding downstream 438695 16489647 ~ 16528087 (-)
acsbg1 NA coding downstream 509028 16447496 ~ 16457754 (-)
LOC103045127 rora,roraa,LOC108433630,LOC106561150,LOC106573506,LOC103141220 coding upstream 4421 16992911 ~ 17425461 (-)
LOC103045440 zgc:162595,LOC108433606,LOC108275248 coding upstream 599538 17588028 ~ 17600473 (-)
etfa etfa,LOC107712526,LOC107557988 coding upstream 973205 17961695 ~ 17975485 (-)
scaper scaper,LOC107712524,LOC107662441 coding upstream 1001997 17990487 ~ 18110831 (-)
LOC103024839 ctdspl2a,LOC108275364,LOC107712523,LOC107688927,LOC107589331,LOC107557990,LOC107662443 coding upstream 1127955 18116445 ~ 18123698 (-)
G74368 NA non-coding downstream 165731 16797045 ~ 16801051 (-)
G74306 NA non-coding downstream 180743 16770442 ~ 16786039 (-)
G74295 NA non-coding downstream 219260 16743060 ~ 16747522 (-)
G74286 NA non-coding downstream 276425 16659503 ~ 16690357 (-)
G74285 NA non-coding downstream 325126 16640842 ~ 16641656 (-)
G74407 NA non-coding upstream 266427 17254917 ~ 17255289 (-)
G74447 NA non-coding upstream 816845 17805335 ~ 17813965 (-)
G74556 tpm1,LOC108441842 non-coding upstream 856636 17845126 ~ 17866138 (-)
G74599 slc27a2,LOC108414297 non-coding upstream 1229799 18218289 ~ 18227676 (-)
G74640 NA non-coding upstream 1362141 18350631 ~ 18350936 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other downstream 496459 16467089 ~ 16470323 (-)
LOC103046265 pkp3 other downstream 1186104 15758303 ~ 15780678 (-)
LOC103040324 NA other downstream 1552169 15381329 ~ 15414613 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other downstream 1752498 15123814 ~ 15214284 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 2169499 14709058 ~ 14797283 (-)
nrg4 NA other upstream 888536 17877026 ~ 17885395 (-)
G74591 isl2,LOC105022634 other upstream 994257 17982747 ~ 18029747 (-)
G74791 NA other upstream 1950684 18939174 ~ 18940464 (-)
LOC103034453 LOC108436916,LOC107753633,LOC107659484,LOC107573489,LOC107752304,LOC108181664,LOC107598834 other upstream 2004178 18992668 ~ 19008366 (-)
G74838 wasl,LOC105896696,LOC108275301 other upstream 2082448 19070938 ~ 19072888 (-)

Expression


Co-expression Network