CI01000009_06913437_06917631


Basic Information

Item Value
gene id CI01000009_06913437_06917631
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 6912470 ~ 6917631 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_06913437_06917631.mRNA
CCGTCAGCAAGAAATTGAGGAGCGTCTGATCGAGGAGGAGACTGCAAGGCGCGTGGAGGAGCTTGTGGCGCGGCGGGTGGAGGAAGAGCTTGAGAAGCGGCGTGACGAGATCGAGCATGAGGTCTTGCGGAGGGTGGAGGAGGCCAAACGCATCATGGAGGCGCAGCTTTTGCAGGAGCTAGAGAGGCAGAGGCAGGCTGAACTGAACGCCCAGAAAGCCAGAGAGTTGTGTAGGTACAGTACACAGTCAAAGGAGAAAGGCGTAGGTATACGAGCATTGGAGGAAGAAAAATCCAAACGAGAGGAGCTGGAGAGAATTTTGGAAGAAAACAACCGAAAGATTGCTGATGCTCAAGCTAAGCTGGCTGAGGATCAGCTACGTATAGTAGAAGAACAAAGGAAGATCCATGAGGAACGCATGAAGCTAGAGCAGGAGAGGCAGAGACAACAGAAAGAGGAACAGAGGATGATATTGGGGAAGGGCAAGTCCCGACCTCGCCTCTCCTTCACTCTCAAAGCTACAGAGTGACCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTTGGATGCGTGCTTCATGTTGAAGTGAATCGGAGTCTCAAAGAGAGGTGTGCTCTGCCCACATAAATTGCTCTTCATAGACCCAGGAAAGGAAAAAAAATTGGAATCCTCACTCTTCAAAACCGGACTTGCAGGCACCACCACAGACTGTTGTTGTTGTTTTTTTTTCAGTGTGTTTTATCGATATTTGACACCATTATGCTGGATGCACCTTCAGAAACATTTTTTCCTTTTCAATTGCAAGCAAATAAGAATGAAGTGTAAATATTTGTGTATATGAGTGTGCGTGGTTGGTTGGTTGTTTGGTCAATATATGTCAGTGGTTTGGGAGCTTGAATAGTACAACCTCAGTTTAACTACTGTACTTGCATTCAAAGCGTCTGAGGGGAAGTGCACAAATGTTTTTAAAAAATGTAAATTGGCAGACTTTTTGTTTTATGCTTATTAGTGAACGTATGTGTGGGAGTGTGAGTATTTTTGTATTTTTTAGACTGCAGACTGAACACCTCAAAGCATAGAGTTCCTAAAATGCTGCTTAATACATAATCCCATAATCACCTGATATGAGCTGTGTTTTTAGCATTGTAACCTAGATCATTTTTGTCCTTTTTGATACGCTTTATTCAAATTGCTCCTTTTTGAAACGTAGAACATAATATGTGTGACCAGAACTTGTTTAGAAATTACAATACAAATATTTCAGTAAAAAAAAGGTTACAATGTTACAAAGTCTTGTAATGTCTAGCGCTCTGTTGGTACCTTAAGGAAATCGGGAATCACAGGTAAGACTAGTTAGGGTGTGTATGTGAGCGAGTTTGTGTGCGTGTATGAGTGTATGCTAGAGGGTGTTCTTGTCTTGTGGTAAATTACCCTTGTGAACTGGGACATTTAGTGTGTTGACCAATAAA

Function

GO: NA

KEGG:

id description
K13173 ARGLU1; arginine and glutamate-rich protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_06913437_06917631.mRNA True 1496 mRNA 0.43 4 6912470 6917631

Neighbor

gene id symbol gene type direction distance location
CI01000009_06891877_06908223 EFNB2A, EFNB2 coding downstream 4247 6891241 ~ 6908223 (-)
CI01000009_06253421_06255264 NA coding downstream 656524 6253421 ~ 6255946 (-)
CI01000009_06250463_06251001 NA coding downstream 661469 6250286 ~ 6251001 (-)
CI01000009_06246303_06248176 SLC10A2 coding downstream 664294 6245570 ~ 6248176 (-)
CI01000009_06237366_06242607 NA coding downstream 669843 6237158 ~ 6242627 (-)
CI01000009_07020336_07047155 NA coding upstream 102684 7020315 ~ 7048177 (-)
CI01000009_07064060_07084764 ZEB2A coding upstream 146166 7063797 ~ 7085218 (-)
CI01000009_07224625_07229839 NA coding upstream 306685 7224316 ~ 7230651 (-)
CI01000009_07383927_07391805 ITM2B coding upstream 466023 7383654 ~ 7391994 (-)
CI01000009_07500752_07541007 LRCH1 coding upstream 582971 7500602 ~ 7541007 (-)
G54499 NA non-coding downstream 264179 6648087 ~ 6648291 (-)
G54488 NA non-coding downstream 279470 6632801 ~ 6633000 (-)
G54417 NA non-coding downstream 338302 6573910 ~ 6574168 (-)
G54411 NA non-coding downstream 342636 6569625 ~ 6569834 (-)
G54387 NA non-coding downstream 377153 6535094 ~ 6535317 (-)
G54836 NA non-coding upstream 33576 6951207 ~ 6951423 (-)
G54839 NA non-coding upstream 35311 6952942 ~ 6953189 (-)
G54849 NA non-coding upstream 44322 6961953 ~ 6962172 (-)
G54877 NA non-coding upstream 198743 7116374 ~ 7116639 (-)
G54878 NA non-coding upstream 200897 7118528 ~ 7118767 (-)
G53515 NA other downstream 1407222 5502395 ~ 5505248 (-)
G52828 NA other downstream 2681001 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 3650513 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 4013063 2883688 ~ 2893975 (-)
G52410 NA other downstream 4349937 2551724 ~ 2562533 (-)
G55814 NA other upstream 1508190 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 1940521 8856310 ~ 8860563 (-)
G59097 NA other upstream 5370586 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 7057757 13975099 ~ 13978614 (-)
G59490 NA other upstream 7115933 14033564 ~ 14037873 (-)

Expression


Co-expression Network