Item | Value |
---|---|
gene id | LOC103029104 |
gene name | fbln1,LOC108429449,LOC108275342 |
gene type | coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035904.1 |
NCBI id | CM008307.1 |
chromosome length | 27092187 |
location | 26391015 ~ 26438288 (-) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
fbln1 | Predicted to enable calcium ion binding activity and peptidase activator activity. Acts upstream of or within several processes, including embryonic medial fin morphogenesis; mesenchymal cell migration; and skin morphogenesis. Predicted to be located in extracellular region. Is expressed in several structures, including atrioventricular canal; caudal fin; median fin fold; mesoderm; and tail bud. Orthologous to human FBLN1 (fibulin 1). |
description |
---|
PREDICTED: fibulin-1-like isoform X1 |
id | name | namespace |
---|---|---|
GO:0007507 | heart development | biological_process |
GO:0043589 | skin morphogenesis | biological_process |
GO:0030198 | extracellular matrix organization | biological_process |
GO:0035122 | embryonic medial fin morphogenesis | biological_process |
GO:0090497 | mesenchymal cell migration | biological_process |
GO:0005509 | calcium ion binding | molecular_function |
id | description |
---|---|
K17307 | FBLN1_2; fibulin 1/2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_022672436.1 | True | 2591 | mRNA | 0.47 | 15 | 26391015 | 26438288 |
XM_022672437.1 | False | 2588 | mRNA | 0.47 | 15 | 26391015 | 26438288 |
XM_022672438.1 | False | 2561 | mRNA | 0.47 | 14 | 26391015 | 26438288 |
XM_022672439.1 | False | 2482 | mRNA | 0.46 | 13 | 26420800 | 26438288 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC103026228 | LOC108429453,LOC107558597,LOC107549599,LOC107701195,LOC107668648,LOC105913426 | coding | downstream | 256171 | 26091262 ~ 26134844 (-) |
yars2 | yars2 | coding | downstream | 306014 | 26079376 ~ 26085001 (-) |
cdkn1b | NA | coding | downstream | 313022 | 26073097 ~ 26077993 (-) |
mrps35 | mrps35 | coding | downstream | 533493 | 25844617 ~ 25857522 (-) |
adck2 | adck2,LOC107669038 | coding | downstream | 729390 | 25655765 ~ 25661625 (-) |
LOC103035555 | ppm1h,LOC108429443 | coding | upstream | 251166 | 26689454 ~ 26716315 (-) |
avpr1a | avpr1a,avpr1ab,LOC107592260,LOC107725953 | coding | upstream | 327805 | 26766093 ~ 26774390 (-) |
fem1b | fem1b,LOC107680899,LOC107575886,LOC107738637 | coding | upstream | 519682 | 26957970 ~ 26966063 (-) |
LOC103035861 | LOC108429396 | coding | upstream | 563940 | 27002228 ~ 27003545 (-) |
G76744 | NA | non-coding | downstream | 56364 | 26334393 ~ 26334651 (-) |
G76727 | NA | non-coding | downstream | 168437 | 26222026 ~ 26222578 (-) |
LOC111193117 | NA | non-coding | downstream | 219914 | 26147148 ~ 26171101 (-) |
G76707 | NA | non-coding | downstream | 244211 | 26145629 ~ 26146804 (-) |
G76706 | NA | non-coding | downstream | 288907 | 26087352 ~ 26102108 (-) |
G76802 | NA | non-coding | upstream | 60625 | 26498913 ~ 26513894 (-) |
G76837 | NA | non-coding | upstream | 234709 | 26672997 ~ 26673388 (-) |
G76851 | NA | non-coding | upstream | 291000 | 26729288 ~ 26729656 (-) |
G76853 | NA | non-coding | upstream | 293491 | 26731779 ~ 26732054 (-) |
G76892 | NA | non-coding | upstream | 420749 | 26859037 ~ 26859471 (-) |
rab3il1 | rab3il1,LOC108429468,LOC107549590 | other | downstream | 1089247 | 25282789 ~ 25301768 (-) |
G76424 | NA | other | downstream | 1206546 | 25184209 ~ 25184469 (-) |
G76377 | NA | other | downstream | 1470650 | 24914298 ~ 24920365 (-) |
LOC103025724 | tmem80 | other | downstream | 1592399 | 24791192 ~ 24798616 (-) |
deaf1 | deaf1,LOC107726848 | other | downstream | 2130485 | 24240898 ~ 24260530 (-) |
LOC103031319 | coro2b,LOC108412540,LOC105018662,LOC107549656,LOC107738688 | other | upstream | 418341 | 26856629 ~ 26878862 (-) |