LOC111193095


Basic Information

Item Value
gene id LOC111193095
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 11767509 ~ 11776139 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002650239.1
taaagacccgatccaaaccatgaccaacagacaccatctgccgaaagattaaacccagctctgccttactctgagttgTTGAAGTGGGCCTTGGTGACGTCCGCCTGGGTTGGTCGTCTGATGCTTCACCCCGAAAAAGGATCACGTGAGCCGGTCTGCAGGGTGGCttgacttcctgtgtcagcacggagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002650239.1 True 192 ncRNA 0.55 3 11767509 11776139

Neighbor

gene id symbol gene type direction distance location
kcnj11 kcnj11,LOC107758740 coding downstream 28138 11737283 ~ 11739371 (-)
LOC103038359 NA coding downstream 682830 11049697 ~ 11084679 (-)
tmem86a tmem86a,LOC107707555,LOC107709947,LOC107688565 coding downstream 738859 11008621 ~ 11028650 (-)
b4galnt4 b4galnt4,LOC108439245 coding downstream 802327 10725524 ~ 10965182 (-)
abtb2 abtb2,abtb2b,LOC107675288,LOC107688574 coding downstream 1049525 10630846 ~ 10717984 (-)
ush1c ush1c,LOC107675293,LOC106561052 coding upstream 29678 11805817 ~ 11834740 (-)
LOC103031503 tnnt3b,LOC108428830,LOC108275000 coding upstream 168286 11944425 ~ 11953789 (-)
LOC103031193 LOC108428829 coding upstream 181431 11957570 ~ 11996201 (-)
LOC103034366 tnni2,LOC103034366,LOC108428827,LOC107742057 coding upstream 257150 12033289 ~ 12036047 (-)
LOC103035544 LOC107742058,LOC107675302,LOC107595230,LOC107758756,LOC107549283,LOC108275297,LOC107675455 coding upstream 260536 12036675 ~ 12041062 (-)
G72974 NA non-coding downstream 32663 11734144 ~ 11734846 (-)
G72967 mob2,LOC108411394,LOC108274974 non-coding downstream 34360 11694678 ~ 11733149 (-)
G72881 NA non-coding downstream 535831 11231179 ~ 11231678 (-)
G72857 NA non-coding downstream 635236 11079088 ~ 11132273 (-)
G72847 NA non-coding downstream 729364 11037508 ~ 11038145 (-)
G73030 NA non-coding upstream 349397 12125536 ~ 12126823 (-)
G73098 NA non-coding upstream 418434 12194573 ~ 12196578 (-)
G73119 LOC108428815,LOC108428741 non-coding upstream 726724 12502863 ~ 12539230 (-)
G73125 NA non-coding upstream 733902 12510041 ~ 12510921 (-)
G73159 fanci,LOC107670230 non-coding upstream 797172 12573311 ~ 12574584 (-)
LOC111193052 NA other downstream 222263 11520887 ~ 11545246 (-)
LOC111193093 NA other downstream 541555 11224779 ~ 11225954 (-)
LOC103046452 rassf7 other downstream 1605025 10101773 ~ 10162484 (-)
LOC103037069 LOC103037069,LOC108442462,LOC101069290,LOC107675263,LOC107562830,LOC107707530,LOC107085412,LOC101171241,LOC103151621 other downstream 1713475 10051952 ~ 10054034 (-)
LOC103042271 LOC108442478,LOC108275244 other downstream 1864616 9856399 ~ 9902893 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other upstream 272487 12048626 ~ 12051489 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other upstream 772551 12548690 ~ 12564978 (-)
G73172 NA other upstream 834695 12610834 ~ 12621356 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other upstream 2766057 14542196 ~ 14545536 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other upstream 2932919 14709058 ~ 14797283 (-)

Expression


Co-expression Network