LOC107197705


Basic Information

Item Value
gene id LOC107197705
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 24949044 ~ 24950022 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002650272.1
AAGACCCCCAGCAGTCTGAGATATCCCTGCTGTGGGCTGGCTAAGCTGACCAGAAACTGATCTGATGTGTTATGTGAATGCTGAACTCGTTGCAGAATAAAAATACCCATCATCCAAACCATGTGGTGTCCATCCTTGGGGCGGGACGGAGTATGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002650272.1 True 158 ncRNA 0.49 3 24949044 24950022

Neighbor

gene id symbol gene type direction distance location
eps8l2 eps8l2 coding downstream 160686 24742769 ~ 24788358 (-)
LOC103024275 lrrc10b,LOC107754340 coding downstream 238942 24706672 ~ 24710102 (-)
pnpla2 LOC108432691 coding downstream 612822 24322366 ~ 24336222 (-)
LOC103030184 LOC108432690,LOC108274702 coding downstream 628240 24279477 ~ 24320804 (-)
pgghg pgghg coding downstream 674845 24262747 ~ 24274199 (-)
LOC103023960 kiaa1644,LOC108274641 coding upstream 63271 25013293 ~ 25101100 (-)
mpi mpi,LOC106560745,LOC106584640 coding upstream 367104 25317126 ~ 25327553 (-)
LOC103047119 neo1,LOC108275206 coding upstream 401503 25351525 ~ 25561947 (-)
bbs4 bbs4,LOC107754319,LOC107701057 coding upstream 665398 25615420 ~ 25631771 (-)
adck2 adck2,LOC107669038 coding upstream 705743 25655765 ~ 25661625 (-)
G76385 NA non-coding downstream 2362 24937194 ~ 24946682 (-)
G76378 NA non-coding downstream 11982 24930903 ~ 24937062 (-)
G76376 NA non-coding downstream 26597 24921173 ~ 24922447 (-)
G76372 NA non-coding downstream 56652 24892161 ~ 24892392 (-)
G76340 NA non-coding downstream 88562 24846041 ~ 24860482 (-)
G76388 NA non-coding upstream 2821 24952843 ~ 24959934 (-)
G76421 NA non-coding upstream 169901 25119923 ~ 25126916 (-)
G76438 NA non-coding upstream 257808 25207830 ~ 25213026 (-)
G76453 NA non-coding upstream 286432 25236454 ~ 25238013 (-)
G76570 NA non-coding upstream 579802 25529824 ~ 25564430 (-)
G76377 NA other downstream 28679 24914298 ~ 24920365 (-)
LOC103025724 tmem80 other downstream 150428 24791192 ~ 24798616 (-)
deaf1 deaf1,LOC107726848 other downstream 688514 24240898 ~ 24260530 (-)
LOC103042310 ucmab,ucma,LOC107720768,LOC107569716,LOC107673257,LOC108275358,LOC107559968 other downstream 1115976 23827214 ~ 23833068 (-)
LOC103033738 LOC103033738,LOC108444230,LOC106560753,LOC105008418,LOC108274439,LOC107549618,LOC107686877 other downstream 1582828 23324577 ~ 23366216 (-)
G76424 NA other upstream 234187 25184209 ~ 25184469 (-)
rab3il1 rab3il1,LOC108429468,LOC107549590 other upstream 332767 25282789 ~ 25301768 (-)
LOC103031319 coro2b,LOC108412540,LOC105018662,LOC107549656,LOC107738688 other upstream 1906607 26856629 ~ 26878862 (-)

Expression


Co-expression Network