trnat-agu_2


Basic Information

Item Value
gene id trnat-agu_2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 20896103 ~ 20896176 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnat-agu_2
GGCGCCGTGGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATcctgggttcgaatcccagcgGTGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu_2 True 74 tRNA 0.55 1 20896103 20896176

Neighbor

gene id symbol gene type direction distance location
LOC103032734 LOC108428429,LOC108275416,LOC107577622,LOC107566260,LOC107682256 coding downstream 18724 20869687 ~ 20877379 (-)
ankrd27 ankrd27 coding downstream 32788 20840504 ~ 20863315 (-)
LOC103029688 si:ch1073-174d20.1,dbndd1,LOC108428370,LOC108275320,LOC107723994,LOC107742629,LOC107559144,LOC107570651 coding downstream 642280 20243366 ~ 20253823 (-)
LOC103045029 LOC108428372 coding downstream 689405 20192525 ~ 20206698 (-)
alkbh3 alkbh3 coding downstream 814768 20073506 ~ 20081335 (-)
LOC103033388 LOC103033709,LOC108428427,LOC105941050,LOC101483816,LOC102290823 coding upstream 6902 20903078 ~ 20905520 (-)
LOC103033709 LOC103033709,LOC108428427,LOC105941050,LOC101483816 coding upstream 12703 20908879 ~ 20910858 (-)
LOC103034889 LOC108428424,LOC108274948 coding upstream 27562 20923738 ~ 20928274 (-)
LOC103036040 ankrd26,LOC108428422 coding upstream 43742 20939918 ~ 20974749 (-)
LOC103038341 LOC108428358 coding upstream 107877 21004053 ~ 21007646 (-)
G75295 NA non-coding downstream 101144 20794484 ~ 20794959 (-)
G75286 NA non-coding downstream 326746 20568847 ~ 20569357 (-)
G75270 NA non-coding downstream 593558 20301885 ~ 20302545 (-)
G75243 LOC108428369,LOC107701578,LOC107742623,LOC107559153,LOC107723981,LOC107570647,LOC107688789 non-coding downstream 611461 20278476 ~ 20284642 (-)
G75265 NA non-coding downstream 619659 20272775 ~ 20276444 (-)
G75357 LOC108428367 non-coding upstream 16655 20912831 ~ 20914086 (-)
G75366 NA non-coding upstream 83226 20979402 ~ 20985652 (-)
G75367 NA non-coding upstream 90018 20986194 ~ 20986762 (-)
G75419 NA non-coding upstream 145931 21042107 ~ 21066403 (-)
G75426 chid1,LOC107674841,LOC107655144 non-coding upstream 165282 21061458 ~ 21063620 (-)
LOC103032014 maf,LOC108428434,LOC108274756,LOC102790406,LOC102298902,LOC101477682,LOC102192535,LOC101173775,LOC100702616,LOC107663990,LOC107565340 other downstream 147895 20622641 ~ 20748208 (-)
hsd17b12 hsd17b12,hsd17b12a,LOC107661451,LOC107696265,LOC107573907,LOC107716735,LOC107753600 other downstream 795853 20084428 ~ 20100250 (-)
G75207 api5,LOC107696269,LOC107753602 other downstream 864076 20027162 ~ 20032027 (-)
G75100 LOC108436948,LOC108275266 other downstream 1030121 19859694 ~ 19865982 (-)
G74838 wasl,LOC105896696,LOC108275301 other downstream 1823215 19070938 ~ 19072888 (-)
gatd1 pddc1,LOC102788149 other upstream 169143 21065319 ~ 21071246 (-)
LOC111193105 LOC102794092,LOC108274651,LOC107571202,LOC108428364 other upstream 373328 21269504 ~ 21273017 (-)
LOC103024007 LOC108428399 other upstream 1546560 22442736 ~ 22574013 (-)
LOC103033738 LOC103033738,LOC108444230,LOC106560753,LOC105008418,LOC108274439,LOC107549618,LOC107686877 other upstream 2428401 23324577 ~ 23366216 (-)
LOC103042310 ucmab,ucma,LOC107720768,LOC107569716,LOC107673257,LOC108275358,LOC107559968 other upstream 2931038 23827214 ~ 23833068 (-)

Expression


Co-expression Network