G7656


Basic Information

Item Value
gene id G7656
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 3611784 ~ 3612934 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU10437
GATTGGTCATGTCATTTTAATTTCCACATTTCCATACAAGTCTTCTCTGCTGACATCAAACTGAATGTTGAGACAAGTCTCAATGTACAAAAGTGACAAAATCTGAGTTGCAAAAATAGGCTGATTACTTTTCACCTGAACTTCACATTTCTGACATTTAGGCTTATTATGAAACAACCCTACTAAACTCACCTGACCTTATTTAAAGAGACCCTATCCTCACATTGTCTACTTATAGACTATGCATAAATTCATGAATCAAAAACAATCACTTAATTTCAAAAAATCTTTTACAGTTAAAGAGGAAGTTTAAGCTACTGTGCCTGGTCGCCATGTATTGTGCCTTAGTTCATAAAGCAGCCCAGAGTGAAACactctttataatctttatatgtATGTAAACATGTTGGATTTTGagacatcacaaaaaaacataggCAGGTCTTTTAGCTTAGTTCTGTTTTCATTTAAGTACATTTTGTGTGTCaaaaaattcagtttttaagGATATACTCCTTTTAAAATCAGGAATGTGAACAAGAACAGttcttaaaaaattacaaaacaattaATGATTGTCTATGCAATTTAGGTCAATATAATGTTTTTCAAGTAGATTTAAAAGGCACTTTAACTCATTTACTCATAAAATCAGGTCTAATTGTTATtctgtgttaaaatataaaccattattataaagttcccttttttttagatgtaaaCATTTAAGGCACATCCATTAGCAAGAATCAAAGAcacaagataagataagacaaaGCGAGGCATTAAAGATTAAGTGGCTCAGAGACAGGTTAAAGGAATAGATGGTTCTTACATGCTATTACGGCTAACTTGCTGATTACCTGAGTAATAGAACTAGTTAAATTCACTGTGCTCTTGTTTAcagttagcaacattagctttAATTGACCAAACTACTCTTTAAACTCCTGGGCCTCAGAGAAGAGTGCAGCAGGACAGTTAGGGCTTTTGGCTTTTGAAGCCGTAGTTGAGCTCGGCTCCTCCACTCAGAAGCAGGTCAATTCCAGTGCAGAAAGTGGCGTCAGCAGCGAGGAACAGTGCCATCAACCCGCTCTCCTCCTCAGTCCCCATCCGGCCCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107662685

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10437 True 1121 lncRNA 0.51 2 3611784 3612934

Neighbor

gene id symbol gene type direction distance location
ifi35 NA coding upstream 24019 3573242 ~ 3587765 (+)
LOC103029856 cacng2a,cacng2,LOC107680886,LOC107561356,LOC107687643,LOC107732897,LOC107729558,LOC108434911 coding upstream 188532 3299338 ~ 3423252 (+)
LOC103027967 LOC108434915 coding upstream 451091 3144487 ~ 3160693 (+)
LOC107196972 mpp2a,LOC108434916,LOC108276091,LOC107737744,LOC107582977,LOC107758486,LOC106600860 coding upstream 475583 3106191 ~ 3136201 (+)
LOC103026748 pyya,LOC108434917,LOC108276154,LOC107689636,LOC107583099,LOC107758485 coding upstream 509787 3065275 ~ 3101997 (+)
LOC111194267 LOC101882592,LOC106911506,LOC107698541,LOC107722802 coding downstream 15753 3628687 ~ 3644274 (+)
LOC103039250 LOC108434931,LOC108278793 coding downstream 29199 3642133 ~ 3656619 (+)
LOC103042028 NA coding downstream 127501 3740435 ~ 3779695 (+)
phb phb,LOC107661032 coding downstream 256475 3869409 ~ 3874948 (+)
znf652 znf652,LOC108258819,LOC107754472,LOC107661072,LOC107745758 coding downstream 267596 3880530 ~ 3904749 (+)
G7651 NA non-coding upstream 39545 3566669 ~ 3572239 (+)
G7636 NA non-coding upstream 43979 3526630 ~ 3567805 (+)
G7637 NA non-coding upstream 76691 3533371 ~ 3535093 (+)
G7603 rpl27,LOC106601555 non-coding upstream 113928 3494371 ~ 3497856 (+)
G7587 NA non-coding upstream 214494 3395595 ~ 3397290 (+)
G7661 hsd17b14,dhb14,LOC107561364,LOC107732853 non-coding downstream 5127 3618061 ~ 3621228 (+)
G7663 NA non-coding downstream 13834 3626768 ~ 3627535 (+)
G7664 NA non-coding downstream 14714 3627648 ~ 3627874 (+)
G7665 NA non-coding downstream 15028 3627962 ~ 3628681 (+)
G7672 NA non-coding downstream 54042 3666976 ~ 3667945 (+)
G7593 LOC107551170,LOC107729520,LOC107687640,LOC108434904,LOC100304518 other upstream 159118 3449221 ~ 3452666 (+)
LOC111193069 dlx4a,LOC108432421,LOC107688148,LOC107590410,LOC107689696,LOC107753083 other upstream 769570 2825128 ~ 2842214 (+)
G7296 sept9,LOC108411966 other upstream 1053440 2530616 ~ 2558344 (+)
carm1 carm1 other upstream 1531243 2050283 ~ 2080541 (+)
LOC103037883 LOC105898698,LOC103360086,LOC101074561,LOC107391594,LOC102794576,LOC103154361,LOC100701095,LOC105938735,LOC105901802 other upstream 1564221 2039387 ~ 2047563 (+)
natd1 natd1,LOC107745813,LOC107689058,LOC107661164 other downstream 311351 3924285 ~ 3929242 (+)
atp6v0a1 atp6v0a1,LOC108444241 other downstream 1139862 4752796 ~ 4802501 (+)
LOC103045997 si:ch211-210g13.5,LOC108441607,LOC107729192,LOC107687011,LOC108256246,LOC107755565 other downstream 1572600 5185534 ~ 5328867 (+)
hcrt hcrt other downstream 1719131 5332065 ~ 5339089 (+)
G8287 ttc25,LOC106601019 other downstream 2115988 5728922 ~ 5729500 (+)

Expression


Co-expression Network