G7665


Basic Information

Item Value
gene id G7665
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 3627962 ~ 3628681 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU10448
cattaaatatatatcttcataagatataatttttttcccttttatgtcaatttttatgatctttttttaaggtcctatttttccttttttacgtatatattttattcgtctataataaatgtcagtttttattcctattttttatatatattattaatcccttttaaactgttaatgctcagcggcactgtaaatgagggtccctatccagtgtgaataaccgattgcttgtttaatattcagtgttgcaaaaccagtttttacataaacaataaacagaataaaaaataaaattattttattttatttaagctgctggtgtttctttcgcagcctgacgcgcagtcatttttctatgcgctctccttctgtaaaacggacaacccgtagagtccacgtcgcctcagccacctgcgagtccatgtacgtctcttccgtggactttcagcgcacaacagggcacaaataagcaaagctaagcgctttcttttgcaaggcgttgtgttgaagcgagagtttgtatgcaaagaaagctccgcctacgggctgcgtttagacgtgcagtgtaagctcccccgtcgcagcaggtcagtcggaccgtacagtgtgtgcagatgaatcgcaggcgttgttcatacacgacaaacgattcaaacgtgctgtttgagctctccagaacgcatccgattaaaaaaatcgcacagtgtccgcctggcttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10448 True 720 lncRNA 0.42 1 3627962 3628681

Neighbor

gene id symbol gene type direction distance location
ifi35 NA coding upstream 40197 3573242 ~ 3587765 (+)
LOC103029856 cacng2a,cacng2,LOC107680886,LOC107561356,LOC107687643,LOC107732897,LOC107729558,LOC108434911 coding upstream 204710 3299338 ~ 3423252 (+)
LOC103027967 LOC108434915 coding upstream 467269 3144487 ~ 3160693 (+)
LOC107196972 mpp2a,LOC108434916,LOC108276091,LOC107737744,LOC107582977,LOC107758486,LOC106600860 coding upstream 491761 3106191 ~ 3136201 (+)
LOC103026748 pyya,LOC108434917,LOC108276154,LOC107689636,LOC107583099,LOC107758485 coding upstream 525965 3065275 ~ 3101997 (+)
LOC111194267 LOC101882592,LOC106911506,LOC107698541,LOC107722802 coding downstream 6 3628687 ~ 3644274 (+)
LOC103039250 LOC108434931,LOC108278793 coding downstream 13452 3642133 ~ 3656619 (+)
LOC103042028 NA coding downstream 111754 3740435 ~ 3779695 (+)
phb phb,LOC107661032 coding downstream 240728 3869409 ~ 3874948 (+)
znf652 znf652,LOC108258819,LOC107754472,LOC107661072,LOC107745758 coding downstream 251849 3880530 ~ 3904749 (+)
G7664 NA non-coding upstream 88 3627648 ~ 3627874 (+)
G7663 NA non-coding upstream 427 3626768 ~ 3627535 (+)
G7661 hsd17b14,dhb14,LOC107561364,LOC107732853 non-coding upstream 6734 3618061 ~ 3621228 (+)
G7656 NA non-coding upstream 15028 3611784 ~ 3612934 (+)
G7651 NA non-coding upstream 55723 3566669 ~ 3572239 (+)
G7672 NA non-coding downstream 38295 3666976 ~ 3667945 (+)
G7695 NA non-coding downstream 159224 3787905 ~ 3796690 (+)
G7772 NA non-coding downstream 226522 3855203 ~ 3856246 (+)
G7789 NA non-coding downstream 313150 3941831 ~ 3944059 (+)
G7795 NA non-coding downstream 325049 3953730 ~ 3954709 (+)
G7593 LOC107551170,LOC107729520,LOC107687640,LOC108434904,LOC100304518 other upstream 175296 3449221 ~ 3452666 (+)
LOC111193069 dlx4a,LOC108432421,LOC107688148,LOC107590410,LOC107689696,LOC107753083 other upstream 785748 2825128 ~ 2842214 (+)
G7296 sept9,LOC108411966 other upstream 1069618 2530616 ~ 2558344 (+)
carm1 carm1 other upstream 1547421 2050283 ~ 2080541 (+)
LOC103037883 LOC105898698,LOC103360086,LOC101074561,LOC107391594,LOC102794576,LOC103154361,LOC100701095,LOC105938735,LOC105901802 other upstream 1580399 2039387 ~ 2047563 (+)
natd1 natd1,LOC107745813,LOC107689058,LOC107661164 other downstream 295604 3924285 ~ 3929242 (+)
atp6v0a1 atp6v0a1,LOC108444241 other downstream 1124115 4752796 ~ 4802501 (+)
LOC103045997 si:ch211-210g13.5,LOC108441607,LOC107729192,LOC107687011,LOC108256246,LOC107755565 other downstream 1556853 5185534 ~ 5328867 (+)
hcrt hcrt other downstream 1703384 5332065 ~ 5339089 (+)
G8287 ttc25,LOC106601019 other downstream 2100241 5728922 ~ 5729500 (+)

Expression


Co-expression Network