CI01000009_07969738_07973990


Basic Information

Item Value
gene id CI01000009_07969738_07973990
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 7969144 ~ 7974033 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_07969738_07973990.mRNA
ACATAAAGTGAAATGCAATTTCAAAAAGTAAGCAGAAAAAGAACTTCTTTTTTGAAAATTTCTGCCCTGTCAGATTTTGCCTTCTTTCTAGCAAATCTTTGATTGACCTCATCTGGGCATGTACCATCATGTCATAACGGATCGTGTTGTGATTCTGCATGTTCAGTCATGCTCGTGCTGATGACTCGCTGTGTTATGACACCTCTGATCCAAAGCTCTGATGCTCAGTCATTCATGTGCACTTTCATTGCCTACTCGTGTGATTCATTCTAATGGGGGGTTATTGCTTAGCCACAGACTGCCTGGGCTTTTTGTTTTTTGGCTTGTTTGCAAGCTAGTTTATGGAATTGTCCCTTGCCTGTTGATGGTGTTTGGTCTTGATTAATTTTATCTTGACTGATCAGTTATCGCAGCTATCTTCTCTCCGCTTGTCTCGTCTCTCAAGCACTCTGTTTTTGGTTGATACACTATCCCTCCGGCCATCCTTGGATAACTGAGGTGTTGCCATTTTCAGATGGATGTTAACCGGTTGGCATAACAAACAGCTTCTAGTTTGAGTTCTAGCCAAGGTGCAGCACTCAAGTGAACTTACTCATGAAAAACTGCGTCTCCTTCAGTTCTCCTTTAGCGCTAACTCTGGGAATGAACTCGCAGGACGCGCAGACAGTGGCAGAAGTCACATGGTTTCACCGTGGCTGGAGACAGATTAAAAGTGGGGCTTTATTCCCTGGTGCCATTAGACAGTCCTACAAGACTATGACCATGAATCATGTTGTACAGGTGCAATACCAAAATGTGCTTGGAGTGCCTGTAACTGCAAAGTCGAATGTCTTCTCATGTTTGTGTGGAGAAATAGGCCATGAGATGCTTTATGTTACAGTGATTTCACTACAGGAGATAACTTTCACCAATATATCAAAAATGAAGCAATTAAAATCAGGAAGGAAGTTATTTCAGGGTGGAATTAGGTCCGGTTTCCTGTTAAAAGTCAGTCTGGTGGGATTGAAAATGCAGTCATACCGGCAGCACCTGTTTTTTCCTCCTGGCTATGTTAGATGCAGGATGTGTCATACATCCATGTACACAGAGTCCCTCGGCTGGCATGTGCTAGACATGAGATTGGTTGGTGGTTTGGCAGCTGGAGAGTCGGCGGTGTGGGGATTCTACCAAGCTGTTGTGTACCCACTGGAAAGTAGACGAGTACACACATTTGCTTTTCTTACTCCATATCAGATCAAGACTCCTTTAGCGCTTCTCAGTCTGTTGGACCATATGGGAGTTTTGCATCTGCACTCAAGATACTCCGCTGTTTTAAATATGACACTCAAATTTCACACTTCCTCGTAGATATCCTTAAATTCAGAGTTTCACTCCCTCATGGTGTTGTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_07969738_07973990.mRNA True 1390 mRNA 0.43 4 7969144 7974033

Neighbor

gene id symbol gene type direction distance location
CI01000009_07555667_07623149 DNAH7 coding upstream 345226 7555667 ~ 7623918 (+)
CI01000009_07545007_07550103 NA coding upstream 418415 7545007 ~ 7550729 (+)
CI01000009_07543034_07544161 NA coding upstream 424983 7543034 ~ 7544161 (+)
CI01000009_07490344_07493862 ESTD, ESD coding upstream 475282 7490248 ~ 7493862 (+)
CI01000009_07440170_07459782 HTR2A, HTR2AA coding upstream 508735 7440039 ~ 7460409 (+)
CI01000009_07982462_07999759 NA coding downstream 8217 7982250 ~ 8000306 (+)
CI01000009_08002011_08021062 TMEFF2 coding downstream 27743 8001776 ~ 8021113 (+)
CI01000009_08027345_08040961 NA coding downstream 51893 8025926 ~ 8040984 (+)
CI01000009_08045921_08048630 NABP1A coding downstream 71486 8045519 ~ 8049154 (+)
CI01000009_08054672_08056508 NA coding downstream 80167 8054200 ~ 8057775 (+)
G55557 NA non-coding upstream 19134 7949711 ~ 7950010 (+)
G55513 NA non-coding upstream 59781 7909050 ~ 7909363 (+)
G55476 NA non-coding upstream 76099 7892846 ~ 7893045 (+)
G55453 NA non-coding upstream 103327 7857959 ~ 7865817 (+)
G55417 NA non-coding upstream 172878 7796036 ~ 7796266 (+)
G55564 NA non-coding downstream 94349 8068382 ~ 8070551 (+)
G55606 NA non-coding downstream 109362 8083395 ~ 8086266 (+)
G55608 NA non-coding downstream 113753 8087786 ~ 8092210 (+)
G55572 NA non-coding downstream 141653 8115686 ~ 8117968 (+)
G55571 NA non-coding downstream 149397 8123430 ~ 8127288 (+)
G53651 NA other upstream 1720752 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 2036343 5931718 ~ 5943899 (+)
G53388 NA other upstream 2430090 5522242 ~ 5540638 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other upstream 4760160 3202207 ~ 3208984 (+)
G51529 NA other upstream 4906557 3062033 ~ 3062587 (+)
G56100 NA other downstream 1155267 9129300 ~ 9130286 (+)
CI01000009_09853929_09854476 SAP18 other downstream 1879326 9853929 ~ 9856587 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other downstream 3786753 11761606 ~ 11766944 (+)
G57811 NA other downstream 3959909 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 4458525 12432538 ~ 12436017 (+)

Expression


Co-expression Network