G8767


Basic Information

Item Value
gene id G8767
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 7872535 ~ 7873913 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU11954
TTTCATTCAAAAGAATTTATTCATCTTTTCCAGATGATTTTGTTCTatgattatttacatatattacaaagGCACTTTTACAAACTGAACAAAACGCAAAGACAAAGACTTTGAAAGGCTATTGGACACAGCCCTTTACAGTGTAGTTTCATGGTAATGACATCGTATTTTCATGGTTAGTGCTTGATGCAGCATCACTCAAAAGGTAACTCTCCAAGAAGCTCATCAAGATCTGCACCCCACAGGGCATCCTCTGAGGTCTGGGGACCTGAAGGCTGAACCACAGCTCTAAGAGGAGCTGCAGCCGAGTTAGCTTCCTTTTCTGGctctgcatcatcatcatcaaagtGCAGCTCCATCTGAGACACAGGGCCCCCTGGAGGCCTGGAGGAATCACACTGTGGTACTCCAGCTGCAGCctgcacaaaaacaaaaaatatatacgttTAAAATGAGTAACAATTAATCCAAAACTGTGGAATTTTTAGGACTTTTGATAGATGTATTTAAAacagacatacatatatacaaatcaTGGCCTTTTTCAGCTAAATGAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11954 True 559 lncRNA 0.40 2 7872535 7873913

Neighbor

gene id symbol gene type direction distance location
LOC103047589 NA coding upstream 60239 7797622 ~ 7812296 (+)
LOC111193218 NA coding upstream 602151 7269129 ~ 7270384 (+)
mpp3 mpp3 coding upstream 1002131 6817071 ~ 6870404 (+)
LOC103043121 NA coding upstream 1066695 6761980 ~ 6805840 (+)
LOC103045761 NA coding upstream 1391297 6425294 ~ 6481238 (+)
LOC103042396 NA coding downstream 24814 7898727 ~ 7906297 (+)
bax bax coding downstream 39460 7913373 ~ 7922529 (+)
gpatch8 gpatch8,LOC107601302,LOC107674594 coding downstream 90260 7964173 ~ 8020034 (+)
LOC103045652 arf2a,arf2b,arf3,LOC103045652,LOC108427419,LOC105013206,LOC107554546 coding downstream 204011 8077924 ~ 8102541 (+)
trnag-acc NA coding downstream 727354 8601267 ~ 8601338 (+)
G8755 NA non-coding upstream 57340 7763617 ~ 7815195 (+)
G8751 NA non-coding upstream 117318 7754435 ~ 7755217 (+)
G8743 NA non-coding upstream 253299 7618186 ~ 7619236 (+)
G8742 NA non-coding upstream 310293 7560165 ~ 7562242 (+)
G8738 NA non-coding upstream 409672 7461858 ~ 7462863 (+)
G8775 NA non-coding downstream 15562 7889475 ~ 7890162 (+)
G8777 rps11,LOC107674708,LOC107590366 non-coding downstream 20475 7894388 ~ 7897929 (+)
G8783 NA non-coding downstream 32720 7906633 ~ 7907002 (+)
G8788 NA non-coding downstream 57220 7931133 ~ 7932921 (+)
G8781 NA non-coding downstream 146353 8020266 ~ 8020713 (+)
LOC103045148 LOC108432039 other upstream 1137832 6709085 ~ 6734703 (+)
nmt1 nmt1,LOC108432052,LOC102778525 other upstream 1495831 6357402 ~ 6376704 (+)
G8287 ttc25,LOC106601019 other upstream 2143035 5728922 ~ 5729500 (+)
hcrt hcrt other upstream 2533446 5332065 ~ 5339089 (+)
LOC103045997 si:ch211-210g13.5,LOC108441607,LOC107729192,LOC107687011,LOC108256246,LOC107755565 other upstream 2543668 5185534 ~ 5328867 (+)
LOC103040872 snu13,LOC103040872,LOC101154660,LOC105910236,LOC107573053 other downstream 564873 8438786 ~ 8441829 (+)
LOC103021541 slc25a17,LOC108412891,LOC107666095,LOC107548713,LOC107743042,LOC566378 other downstream 590203 8464116 ~ 8485936 (+)
G9074 NA other downstream 721956 8595869 ~ 8596783 (+)
G9113 NA other downstream 935788 8809701 ~ 8810467 (+)
bri3 bri3 other downstream 1045916 8919829 ~ 8931005 (+)

Expression


Co-expression Network