G9469


Basic Information

Item Value
gene id G9469
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 10393462 ~ 10395480 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU12844
CTGATGGTTGCTCTGATGGTTGCTCTGATGGTGGCTTTGGTGGTTGCTCTGATGGTGGCTTTGGTGGTTGTTCTGGTGTTTGTTCTGGTGTTTGTTCTGGTGgttgctctggtggttgctctggtggttgctctggtggttgctctggtggttgctctggtggttgctctggtggttgctctggtggttgctctggtggttgctctggtggttgctttggtggttgctaggtattccaggtggttgtaACACTccaaaatattgtatattgatGTTGCAAGTGTGACAAAAGTGCCAAAACCTCTGCACTCCATTTGTTCTTATAGGgaaaaattacacaaaaatcTGTTGCTACACTGTAACCATACATTTGATCAAAAAGCATATGTTTGCAAAGTACAGTGTTAATTAAGCAGTATGCAGTATGAGCCCACACATTGAATGCAAATGATTGGGCAGTAGAAAGCAGTACATACGTAATGATGTGTGGGAAAACATTATCTAACGTGGACACatttttgctgtgtttgtgcatgtggtGAGGATAATGACAGAACGGTGTTGGTGATGTTTTCCACTTGAAAAACAGGCCGTGGTCCACACCCATGCAGAGCTACAGCTTTCCTGCTTTATCTGAGAGAGCAGAATCAGAGACACTAACATTTACGCTCATTTAAATTAGACAGCttcactgcctggccaaaaaacaccttgaaattaagtcacgaTACGTTGATTGAAGAGCACAAACAAATAGGTAGGATCCAGGAACAGATTAATTCAGTGAAAATGCATAAATATTGTAAAGATATTTTtaagcaacagctggaatttgacttaatttcaagCTTTTTAATTCGCTACTTGTAGCGAATAGTAGTGCCTCATTTTGAAtctcagggccctcagaattctaccaatgaagtgtggagctactctgAGCTTGATAATGGTGTAAAACTTGTCATTTCTTTGGATGGGCAgagctatgcccctatcacttgcGTTGTAAGCCAGTTGGGAGCATTGGTTAAAAGTGCTGTACTCCGGAATGCTGGGGGAGAACAAAGGTGGGTTACTTGACAAAAATTTGTATTCATCAGCATGTTTTTCCACACCTCAAGTCTATTTCACATAGGACTTCTCCTTTAAGCTTTGCTCTACTCGTGATTTTGCTTGGTCAGGTTGATCATGCTTCATGCTTGTAGAACCCCTAAACCAGTAAACTCAAGCCAAACCCCTTTAAAAGCCTGTAAACCCTATACTGCCTTTAAgcgccctcacaggttcaactgtgctatacaTTGTGATGTAtctatcacaatatgcaaatcagtcaatcaataatacggCCCCTCTGATGACTTCCAGCCATCTGCGACTCatcgctatcagaggcacactgctgctgctacaacTCAGCCAATAAGCTTtccctctaaacccatacatcacccaatgccCAATCTAAAGTTCTAAAGTACcccttcccattttttttttttttttgtacaatttttcAAATTTAGGGTATTTAGTAGCCCTTTAACTAATCTGGTCAGGAGCTAAGCTGGTGTTTCTAAAGGGTGTTCAAAACCTGCTGCCTTGATGCTAACAGAACACTTGAAATTACATAGAGATGCTAGTGCAAATTAGCATTGTTGTTGGTGCAGTAATCTTAGAATGAAATGTTCTCTATTAAACACTGCTGTAGTCTGATATTATATGGCAGAAAAAAAGTTGTGAAATAACTGCAGTGCAGAGTGGACTTCTTGTCCTTCGGCAGGCCATGGTTGCTTGGCAACAGTAGCATATCCTAAAGGAACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12844 True 1827 TUCP 0.45 2 10393462 10395480

Neighbor

gene id symbol gene type direction distance location
LOC103027572 LOC105910934,LOC103366175,LOC102289484,LOC102197495,LOC101481562,LOC100706198 coding downstream 421348 9940770 ~ 9972114 (-)
tbl3 tbl3,LOC100195964 coding downstream 509674 9854473 ~ 9883788 (-)
tom1l2 tom1l2 coding downstream 592331 9761047 ~ 9801131 (-)
srebf1 srebf1 coding downstream 637371 9726681 ~ 9756091 (-)
LOC103023040 nptx2,nptx2a,LOC107724745,LOC107713953,LOC107665931,LOC107573982,LOC108275595 coding downstream 1302513 9076288 ~ 9090949 (-)
LOC103028714 LOC108432238,LOC108277388,LOC106606311 coding upstream 63724 10459204 ~ 10466183 (-)
LOC107197110 LOC108432236,LOC108277373,LOC105898716 coding upstream 73717 10469197 ~ 10554323 (-)
LOC111193327 hs3st3a1,LOC108432232,LOC106589629,LOC107704231 coding upstream 743055 11138535 ~ 11165212 (-)
rnf222 rnf222 coding upstream 899161 11294641 ~ 11296760 (-)
LOC103042626 NA coding upstream 925275 11320755 ~ 11335445 (-)
G9468 NA non-coding downstream 3554 10388000 ~ 10389908 (-)
G9467 NA non-coding downstream 6170 10386010 ~ 10387292 (-)
G9465 NA non-coding downstream 14806 10377702 ~ 10378656 (-)
G9464 NA non-coding downstream 17807 10373969 ~ 10375655 (-)
G9343 gid4,LOC107724729,LOC106601817,LOC107555661 non-coding downstream 561159 9822309 ~ 9832303 (-)
G9470 NA non-coding upstream 16662 10412142 ~ 10412628 (-)
G9487 NA non-coding upstream 174826 10570306 ~ 10615224 (-)
LOC111193324 NA non-coding upstream 211984 10607464 ~ 10620735 (-)
G9495 NA non-coding upstream 235655 10631135 ~ 10631489 (-)
G9497 NA non-coding upstream 280114 10675594 ~ 10676024 (-)
LOC111194270 NA other downstream 167972 10221156 ~ 10225490 (-)
G9350 rai1 other downstream 683061 9709792 ~ 9710401 (-)
G9285 NA other downstream 888999 9503908 ~ 9504463 (-)
cacng4 cacng4b,LOC108412836,LOC107691234,LOC107565862,LOC107713946,LOC108259704,LOC107548710 other downstream 1641401 8674912 ~ 8752061 (-)
LOC103040571 c16orf52.L,c17h16orf52,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 other downstream 1973088 8379399 ~ 8420374 (-)
G9632 atp5h,LOC103042933,LOC103361245,LOC107670447 other upstream 944660 11340140 ~ 11344262 (-)
LOC103022087 foxd1,LOC103022087,LOC106569011,LOC108432165 other upstream 1280674 11676154 ~ 11678108 (-)
G10089 akt1s1,LOC107564011,LOC107680841 other upstream 2417545 12813025 ~ 12817186 (-)
LOC103034410 lrrc4b,lrrc4ba,LOC103034410,LOC107680881,LOC107551155,LOC107667844,LOC107563987,LOC107732840 other upstream 2753877 13149357 ~ 13292878 (-)
LOC103034594 ppp1caa,LOC103034594,LOC105897688,LOC108280818,LOC103367324,LOC101477563,LOC105894037 other upstream 3643378 14038858 ~ 14083107 (-)

Expression


Co-expression Network