G9632 (atp5h,LOC103042933,LOC103361245,LOC107670447)


Basic Information

Item Value
gene id G9632
gene name atp5h,LOC103042933,LOC103361245,LOC107670447
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 11340140 ~ 11344262 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU13065
TCAAAACttcaaatgtttatttgtttttttttcagtcatacATACAAGAGAACTGAGCAAACTCTTCTTCACTGAAGTGTTTAACAGATCAGACTACAGAACATAATCCAActcaaattattattaacttAGAACACAGCTAATAAATTACAGATCAGCAATAGGCTTGTGTGGCCAGTATGGATACTTGGCCTTGTCGAGCTTCGTCTCTGGGAAAGTATGATTCAGGTCTTCAATGGTCATCTGATCGAACGGAATCATGTTATTGAACTTCCCAAGCTCCTGTTCGTACTGAACGATGCGAGCCTTGGAGGCCTGAATGTAATCTAAAGCGCTTTTGTTAGACTCTTGCTCTTGGGTATTAATTTTAGCAGTCTGGGTGTCCACTGGTTCAGGAACAGTCAAAGCAGCAAACTTCTTCTCAAACTCATCCACCATGCCTGCTTTAGCCACTGTCTTCCTGTAGTAACTCCAGTCGATGGGGGCTGGCTTCTCTGGCAGTGAGGCTAATTTAGCAGAGATGGCATCACTGCGGGTCTTCAGATTGTTGAACATCGCTTTCTGGTTGGGAGGGACCCTCTCAGCAAAGGCCACCCAATCAACAGCCTTTATGGCAGCTCTTCGCCCTGCCATCTCTCGGGTTCTTCAAATACCAAACCGCTGCAGAGACAGACCAGCGAGGGCACCCAGACCGGAAACAGCGGCTGTTGCTCCAGAACCCGAACACAGCTCTCCGCGCTTACTGACACCTAGCGGACCGGACCGGAACCGCtgggtgttctgtcgagttgtg

Function

symbol description
atp5h Predicted to enable proton transmembrane transporter activity. Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in mitochondrial ATP synthesis coupled proton transport. Predicted to act upstream of or within ion transport. Located in mitochondrion. Is expressed in several structures, including alimentary system; integumental system; nervous system; respiratory system; and sensory organ. Orthologous to human ATP5PD (ATP synthase peripheral stalk subunit d).

NR:

description
PREDICTED: transferrin receptor protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13065 True 793 TUCP 0.45 6 11340140 11344262

Neighbor

gene id symbol gene type direction distance location
LOC103042626 NA coding downstream 4695 11320755 ~ 11335445 (-)
rnf222 rnf222 coding downstream 43380 11294641 ~ 11296760 (-)
LOC111193327 hs3st3a1,LOC108432232,LOC106589629,LOC107704231 coding downstream 174928 11138535 ~ 11165212 (-)
LOC107197110 LOC108432236,LOC108277373,LOC105898716 coding downstream 785817 10469197 ~ 10554323 (-)
LOC103028714 LOC108432238,LOC108277388,LOC106606311 coding downstream 873957 10459204 ~ 10466183 (-)
LOC103047733 unm_sa1261,LOC108432226,LOC107726818,LOC108274299,LOC107573384,LOC107674909 coding upstream 30495 11374757 ~ 11401811 (-)
hmox1 hmox1,LOC108432221 coding upstream 233542 11577804 ~ 11584104 (-)
spc24 spc24 coding upstream 410743 11755005 ~ 11759811 (-)
kri1 NA coding upstream 421353 11765615 ~ 11776390 (-)
ldlr ldlr coding upstream 443070 11787332 ~ 11810115 (-)
G9620 NA non-coding downstream 49617 11282237 ~ 11290523 (-)
G9611 NA non-coding downstream 135062 11193528 ~ 11205078 (-)
G9578 NA non-coding downstream 265458 11073812 ~ 11074682 (-)
G9583 NA non-coding downstream 277146 11062621 ~ 11062994 (-)
G9582 NA non-coding downstream 277804 11062137 ~ 11062336 (-)
G9639 NA non-coding upstream 9320 11353582 ~ 11353896 (-)
G9645 NA non-coding upstream 20208 11364470 ~ 11365006 (-)
G9682 NA non-coding upstream 138297 11482559 ~ 11484544 (-)
G9681 NA non-coding upstream 139949 11484211 ~ 11489812 (-)
G9689 NA non-coding upstream 149333 11493595 ~ 11505952 (-)
G9469 NA other downstream 944660 10393462 ~ 10395480 (-)
LOC111194270 NA other downstream 1114650 10221156 ~ 10225490 (-)
G9350 rai1 other downstream 1629739 9709792 ~ 9710401 (-)
G9285 NA other downstream 1835677 9503908 ~ 9504463 (-)
cacng4 cacng4b,LOC108412836,LOC107691234,LOC107565862,LOC107713946,LOC108259704,LOC107548710 other downstream 2588079 8674912 ~ 8752061 (-)
LOC103022087 foxd1,LOC103022087,LOC106569011,LOC108432165 other upstream 331892 11676154 ~ 11678108 (-)
G10089 akt1s1,LOC107564011,LOC107680841 other upstream 1468763 12813025 ~ 12817186 (-)
LOC103034410 lrrc4b,lrrc4ba,LOC103034410,LOC107680881,LOC107551155,LOC107667844,LOC107563987,LOC107732840 other upstream 1805095 13149357 ~ 13292878 (-)
LOC103034594 ppp1caa,LOC103034594,LOC105897688,LOC108280818,LOC103367324,LOC101477563,LOC105894037 other upstream 2694596 14038858 ~ 14083107 (-)
G10560 NA other upstream 2896799 14241061 ~ 14243794 (-)

Expression


Co-expression Network