G10200 (LOC107747660)


Basic Information

Item Value
gene id G10200
gene name LOC107747660
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 13134601 ~ 13135118 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU13803
tgccgaagaagtccacagtgtcctgcctcaatgactaccgtcccgttgcacttacacccatcatcatgaagtgcttcgagaggctagtcatgaggaacatcaagacacaactgccctcttcactggaccccctgcagtttgcgtatcgtcccaatcgctccacggacgatgccatcaccaccacccttcatctctccctcacccacctggagaagaaggacacttacgtcagaatgctgtttatagacttcagttcagcattcaacaccatcatcccacagaacctcaccaggaagctaagctcgctcggcctcaacacccccctctgcaactggatcctggactttctgacggggagaccccagtcagtccggttcgggggcagcacctccagcaccatcacactgaacacgggggccccccagggcagtgtcctgagtcctttgctgttcaccctgctgactcatgactgtgctgcaaaacacagttctaacagctttatcaagttcgccgatgat

Function

NR:

description
PREDICTED: myelin-associated glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13803 True 518 TUCP 0.55 1 13134601 13135118

Neighbor

gene id symbol gene type direction distance location
mybpc2 mybpc2,LOC107729557,LOC107687621,LOC107680879,LOC107732898 coding upstream 133506 12895896 ~ 13001095 (+)
LOC111188181 LOC108432168 coding upstream 650023 12474217 ~ 12484578 (+)
LOC103029671 cbx8,LOC108432169,LOC102784560 coding upstream 663347 12468650 ~ 12471254 (+)
LOC103031044 NA coding upstream 671348 12451903 ~ 12463253 (+)
gaa LOC106601771 coding upstream 832887 12283270 ~ 12301714 (+)
LOC103034911 LOC103034911,LOC108280870,LOC108427336 coding downstream 966748 14101866 ~ 14112197 (+)
LOC111194173 NA coding downstream 1066233 14201351 ~ 14213960 (+)
LOC103039204 NA coding downstream 1090065 14225183 ~ 14230983 (+)
LOC103036166 LOC108427338 coding downstream 1097111 14232229 ~ 14242075 (+)
LOC103037400 LOC108427346 coding downstream 1215394 14350512 ~ 14352765 (+)
LOC111194170 NA non-coding upstream 45155 13088620 ~ 13089446 (+)
G10165 NA non-coding upstream 48032 13085461 ~ 13086569 (+)
G10152 NA non-coding upstream 75223 13059133 ~ 13059378 (+)
G10150 NA non-coding upstream 75567 13058778 ~ 13059034 (+)
G10146 NA non-coding upstream 87726 13045715 ~ 13046875 (+)
G10242 NA non-coding downstream 168899 13304017 ~ 13304227 (+)
G10256 NA non-coding downstream 203114 13338232 ~ 13340242 (+)
G10261 NA non-coding downstream 240714 13375832 ~ 13378052 (+)
G10263 med25 non-coding downstream 243789 13378907 ~ 13387921 (+)
G10266 syt3,LOC106593647,LOC107680842,LOC107732896 non-coding downstream 279284 13414402 ~ 13456584 (+)
akt1s1 akt1s1,LOC107564011,LOC107680841 other upstream 312610 12774213 ~ 12821991 (+)
G10003 NA other upstream 516404 12613691 ~ 12618197 (+)
arhgap17 LOC108432202,LOC108279379 other upstream 534071 12527689 ~ 12600530 (+)
tbc1d16 tbc1d16,LOC107559246,LOC107689993,LOC107670685,LOC107562324,LOC107758097 other upstream 753253 12302527 ~ 12381348 (+)
luc7l3 luc7l3,LOC107674472,LOC107726809,LOC107654661 other upstream 1696269 11429073 ~ 11438332 (+)
G10362 LOC108427334 other downstream 879234 14014352 ~ 14020095 (+)
G10450 LOC103035240,LOC108427335,LOC107732842,LOC107674167,LOC107563993,LOC107732871,LOC107658445,LOC107729508,LOC108280773 other downstream 982494 14117612 ~ 14164106 (+)
LOC111193423 arl6ip1,LOC107658451 other downstream 1179674 14314792 ~ 14398695 (+)
LOC103036470 NA other downstream 1181289 14316407 ~ 14321860 (+)
G10503 tceb2,LOC103036770,LOC108427344,LOC107564001,LOC108280902,LOC105012960 other downstream 1226747 14361865 ~ 14371518 (+)

Expression


Co-expression Network