G10232


Basic Information

Item Value
gene id G10232
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 13212557 ~ 13213158 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU13836
ctccgcttttagactctttggcccgtttttctgcgctagaaatgcgcaccctctccgcttttagactctttggaccgtttctgtcacctagcgttcaaactttgaatctcacattataaaaacctgcttaacagcgggccaactttcattctatttctaaaatacctcacgggccgctccaaaaaaggaaacgggccgtaatttggacacccctggcttaGAAAGATGCTTAACTCTGAAACCAACCCTTAGACAGTTGCTCTACTCAGGAGCCAACATTTAGAGAGTTGCCCCACTGTTGCCCCACTCTGAAACCAACCCTTAGAAGGTTATTTCACTCGCTTAGAAATTCAGGAACCGACATTTAGACAATTGCCCTATTCTGAAGCCAACTCTTAGACAGTTGTTCTACTCAGGGGCTAATGCTTAGTTGCCCCACtctgaaacccaacatttaGACAGTTGTCCCACTCTAAGACCAAACTTTAGAAAGATGCACCACCCAGGAACCAGCACTTAAAAAGTTGCTCCCCTCTGAAAGCAATACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13836 True 549 lncRNA 0.45 2 13212557 13213158

Neighbor

gene id symbol gene type direction distance location
LOC111193378 NA coding downstream 116101 13093203 ~ 13096456 (-)
emc10 emc10,LOC107551156,LOC107729566,LOC107687623 coding downstream 323576 12876778 ~ 12888981 (-)
LOC111193363 LOC108434907 coding downstream 347782 12826988 ~ 12864775 (-)
tbc1d17 tbc1d17,LOC107687627,LOC107729504,LOC107680857,LOC107551157,LOC107563983 coding downstream 405643 12778323 ~ 12806914 (-)
LOC111193357 LOC108434909 coding downstream 444926 12761269 ~ 12767631 (-)
med25 med25 coding upstream 124843 13338001 ~ 13387939 (-)
syt3 syt3,LOC107551154,LOC107563990 coding upstream 210868 13424026 ~ 13540925 (-)
LOC103033311 si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107729493,LOC107551153,LOC105012945,LOC106595301 coding upstream 418621 13631779 ~ 13671682 (-)
LOC103038885 shank1,LOC108427331,LOC107732841 coding upstream 470721 13683879 ~ 13964838 (-)
LOC103035240 LOC103035240,LOC108427335,LOC107658445,LOC107729508,LOC108280773,LOC107583063 coding upstream 904433 14117591 ~ 14148282 (-)
G10191 NA non-coding downstream 91483 13120819 ~ 13121074 (-)
G10189 NA non-coding downstream 94326 13117988 ~ 13118231 (-)
G10184 NA non-coding downstream 102263 13110093 ~ 13110294 (-)
G10182 NA non-coding downstream 105045 13107258 ~ 13107512 (-)
G10157 NA non-coding downstream 144818 13067121 ~ 13067739 (-)
G10284 NA non-coding upstream 186725 13399883 ~ 13408606 (-)
G10302 NA non-coding upstream 371209 13584367 ~ 13584612 (-)
G10303 NA non-coding upstream 372292 13585450 ~ 13585919 (-)
G10379 NA non-coding upstream 460797 13673955 ~ 13675293 (-)
G10413 NA non-coding upstream 703966 13917124 ~ 13917838 (-)
G10089 akt1s1,LOC107564011,LOC107680841 other downstream 395371 12813025 ~ 12817186 (-)
LOC103022087 foxd1,LOC103022087,LOC106569011,LOC108432165 other downstream 1534449 11676154 ~ 11678108 (-)
G9632 atp5h,LOC103042933,LOC103361245,LOC107670447 other downstream 1868295 11340140 ~ 11344262 (-)
G9469 NA other downstream 2817077 10393462 ~ 10395480 (-)
LOC111194270 NA other downstream 2987067 10221156 ~ 10225490 (-)
LOC103034594 ppp1caa,LOC103034594,LOC105897688,LOC108280818,LOC103367324,LOC101477563,LOC105894037 other upstream 825700 14038858 ~ 14083107 (-)
G10560 NA other upstream 1027903 14241061 ~ 14243794 (-)
hsd3b7 hsd3b7,LOC106601563 other upstream 1406218 14619376 ~ 14656561 (-)
LOC103040656 LOC108427315 other upstream 1574912 14788070 ~ 14797643 (-)
G10767 NA other upstream 1709807 14922965 ~ 14923959 (-)

Expression


Co-expression Network