G10284


Basic Information

Item Value
gene id G10284
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 13399883 ~ 13408606 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU13908
ataattttaaagaatatattttaattaatttgtatttcaatgaggaaaataagtatttgatccctcttgccaaacacactcaatacttagtggcaaagcctttgtttgcaagcacagcggtgagacgtttgttgtagttaaccacaagtttagcacacacaccagggggaattttggcccactcttctttgcagatcctctctaaatcatgaaggttggtgggctgtcgcttggcaactctgaccttcagctccctccatagattttcgatcggattgaggtctggcgactggctgggccactccatgaccttaatgtgatttttcttgagccaatcctttgttgcctttgctgtatgtttagggtcgttatcatgttggaagacccaaccacggcccattttcagatccctggcagaggggaggaggttgtccctcaggattgtgcggtacatggctccatccatcttcccagtgatgcggtgaagtagccctgtacccttggcagagaaacacccccaaaacattatgcttccacctccatgcttgacggtgggcacagtgttcttggggtcataggcagcatttttcttcctccacacatggcgggtggagttgaggccaaaaagttcaattttggtctcgtctgaccacaaaaccttctcccaataacttggttcatctttcaaatgatcattggcatacttgaggcgcgcctccacatgtgctctCTTCAGGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13908 True 740 lncRNA 0.40 2 13399883 13408606

Neighbor

gene id symbol gene type direction distance location
med25 med25 coding downstream 11944 13338001 ~ 13387939 (-)
LOC111193378 NA coding downstream 303427 13093203 ~ 13096456 (-)
emc10 emc10,LOC107551156,LOC107729566,LOC107687623 coding downstream 510902 12876778 ~ 12888981 (-)
LOC111193363 LOC108434907 coding downstream 535108 12826988 ~ 12864775 (-)
tbc1d17 tbc1d17,LOC107687627,LOC107729504,LOC107680857,LOC107551157,LOC107563983 coding downstream 592969 12778323 ~ 12806914 (-)
syt3 syt3,LOC107551154,LOC107563990 coding upstream 15420 13424026 ~ 13540925 (-)
LOC103033311 si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107729493,LOC107551153,LOC105012945,LOC106595301 coding upstream 223173 13631779 ~ 13671682 (-)
LOC103038885 shank1,LOC108427331,LOC107732841 coding upstream 275273 13683879 ~ 13964838 (-)
LOC103035240 LOC103035240,LOC108427335,LOC107658445,LOC107729508,LOC108280773,LOC107583063 coding upstream 708985 14117591 ~ 14148282 (-)
LOC103035550 paqr4,paqr4a,LOC105897660,LOC106601588 coding upstream 757834 14166440 ~ 14197240 (-)
G10232 NA non-coding downstream 186725 13212557 ~ 13213158 (-)
G10191 NA non-coding downstream 278809 13120819 ~ 13121074 (-)
G10189 NA non-coding downstream 281652 13117988 ~ 13118231 (-)
G10184 NA non-coding downstream 289589 13110093 ~ 13110294 (-)
G10182 NA non-coding downstream 292371 13107258 ~ 13107512 (-)
G10302 NA non-coding upstream 175761 13584367 ~ 13584612 (-)
G10303 NA non-coding upstream 176844 13585450 ~ 13585919 (-)
G10379 NA non-coding upstream 265349 13673955 ~ 13675293 (-)
G10413 NA non-coding upstream 508518 13917124 ~ 13917838 (-)
G10429 NA non-coding upstream 601570 14010176 ~ 14010413 (-)
LOC103034410 lrrc4b,lrrc4ba,LOC103034410,LOC107680881,LOC107551155,LOC107667844,LOC107563987,LOC107732840 other downstream 107005 13149357 ~ 13292878 (-)
G10089 akt1s1,LOC107564011,LOC107680841 other downstream 582697 12813025 ~ 12817186 (-)
LOC103022087 foxd1,LOC103022087,LOC106569011,LOC108432165 other downstream 1721775 11676154 ~ 11678108 (-)
G9632 atp5h,LOC103042933,LOC103361245,LOC107670447 other downstream 2055621 11340140 ~ 11344262 (-)
G9469 NA other downstream 3004403 10393462 ~ 10395480 (-)
LOC103034594 ppp1caa,LOC103034594,LOC105897688,LOC108280818,LOC103367324,LOC101477563,LOC105894037 other upstream 630252 14038858 ~ 14083107 (-)
G10560 NA other upstream 832455 14241061 ~ 14243794 (-)
hsd3b7 hsd3b7,LOC106601563 other upstream 1210770 14619376 ~ 14656561 (-)
LOC103040656 LOC108427315 other upstream 1379464 14788070 ~ 14797643 (-)
G10767 NA other upstream 1514359 14922965 ~ 14923959 (-)

Expression


Co-expression Network