G10379


Basic Information

Item Value
gene id G10379
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 13673955 ~ 13675293 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU14028
ttttatattactgcGTACAATACTGTATGGCACACCtactgctgtgtgaacataaatataaaacaaaaagccTGCTGTGATCCGACATACCTCAGAATAATTCACGGAGACTCCAGAACAGTCTGGCCCGCACACAACAGAGTCCTCCCGCTTACTAAACGCAAAGCCTCTCCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14028 True 177 lncRNA 0.45 2 13673955 13675293

Neighbor

gene id symbol gene type direction distance location
LOC103033311 si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107729493,LOC107551153,LOC105012945,LOC106595301 coding downstream 2273 13631779 ~ 13671682 (-)
syt3 syt3,LOC107551154,LOC107563990 coding downstream 133030 13424026 ~ 13540925 (-)
med25 med25 coding downstream 286016 13338001 ~ 13387939 (-)
LOC111193378 NA coding downstream 577499 13093203 ~ 13096456 (-)
emc10 emc10,LOC107551156,LOC107729566,LOC107687623 coding downstream 784974 12876778 ~ 12888981 (-)
LOC103038885 shank1,LOC108427331,LOC107732841 coding upstream 8586 13683879 ~ 13964838 (-)
LOC103035240 LOC103035240,LOC108427335,LOC107658445,LOC107729508,LOC108280773,LOC107583063 coding upstream 442298 14117591 ~ 14148282 (-)
LOC103035550 paqr4,paqr4a,LOC105897660,LOC106601588 coding upstream 491147 14166440 ~ 14197240 (-)
LOC103039514 LOC108427305 coding upstream 573381 14248674 ~ 14292162 (-)
LOC111193418 NA coding upstream 655709 14331002 ~ 14333447 (-)
G10303 NA non-coding downstream 88036 13585450 ~ 13585919 (-)
G10302 NA non-coding downstream 89343 13584367 ~ 13584612 (-)
G10284 NA non-coding downstream 265349 13399883 ~ 13408606 (-)
G10232 NA non-coding downstream 460797 13212557 ~ 13213158 (-)
G10191 NA non-coding downstream 552881 13120819 ~ 13121074 (-)
G10413 NA non-coding upstream 241831 13917124 ~ 13917838 (-)
G10429 NA non-coding upstream 334883 14010176 ~ 14010413 (-)
G10430 NA non-coding upstream 346394 14021687 ~ 14021889 (-)
G10561 NA non-coding upstream 630979 14306272 ~ 14306530 (-)
G10595 NA non-coding upstream 1017489 14692782 ~ 14694894 (-)
LOC103034410 lrrc4b,lrrc4ba,LOC103034410,LOC107680881,LOC107551155,LOC107667844,LOC107563987,LOC107732840 other downstream 381077 13149357 ~ 13292878 (-)
G10089 akt1s1,LOC107564011,LOC107680841 other downstream 856769 12813025 ~ 12817186 (-)
LOC103022087 foxd1,LOC103022087,LOC106569011,LOC108432165 other downstream 1995847 11676154 ~ 11678108 (-)
G9632 atp5h,LOC103042933,LOC103361245,LOC107670447 other downstream 2329693 11340140 ~ 11344262 (-)
G9469 NA other downstream 3278475 10393462 ~ 10395480 (-)
LOC103034594 ppp1caa,LOC103034594,LOC105897688,LOC108280818,LOC103367324,LOC101477563,LOC105894037 other upstream 363565 14038858 ~ 14083107 (-)
G10560 NA other upstream 565768 14241061 ~ 14243794 (-)
hsd3b7 hsd3b7,LOC106601563 other upstream 944083 14619376 ~ 14656561 (-)
LOC103040656 LOC108427315 other upstream 1112777 14788070 ~ 14797643 (-)
G10767 NA other upstream 1247672 14922965 ~ 14923959 (-)

Expression


Co-expression Network