G10767


Basic Information

Item Value
gene id G10767
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 14922965 ~ 14923959 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU14530
tttttgtgcagaaagcaaatcaggtgttcaccgcacctgtcctactcgttagactaatcacagaactcgttacctggaaaaaaatttgctcagctgagctttccaaaaggcccatttaggccatttaactgtgacactgttgttttattgaattagaataatggagaaaccgtttcattgaattagaataaatgctggaatttttgttttctgtgaagagtgttcactgtgcagtataaagtcagggttgagtagaatttctaagttgtaaaatcaatcatgggtaagcagcgcgacctctcaaccggaatagtggctcaaattcaagcccttcgccaacaaggcttgacccaaactaaaattgctgagcagctcggcatcagccagtcttccgtctgcaaagctctcaagaaaaactgcagcaagcgcaccaactgttccggcgtccgaaaaacttctgctcgcgacaacaagcagctgagaaagatcgcagtcagcaaccggttcaagtccacttccgagctcaccgacttgtggaacaagcagaccggcgctgacgtctccagatcaaccacttaccgtcgtctgcgcgaactcggcttcaaatctcgcgttccagcagtaaaaccgatgctgaacaagaaacaaatggagaaacggctgaagtgggccaaagaacacggcgagtggactgctgaagactggcagaaagtggtcttcagtgacgaatcacgcttctgcatctccttcggtgaccaaggtcctcgtgtctggcgtcgtggtggcgaaacctacaaccacgggtgcgtgaaaagatccgtcaagtttccccagagcgttatggtctggggatgcatgtccgctcgaggtgtagggaaactctgcttcctcaagaagactgtcaatgctgccgtatatcaagatgttctggaaacgttcctgattccgactgttgaggaacagttcggcgaagaagacttcatatttcaacagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14530 True 995 TUCP 0.48 1 14922965 14923959

Neighbor

gene id symbol gene type direction distance location
LOC103041773 LOC103041773,LOC108427309,LOC108280499,LOC107689658,LOC107658437,LOC107583101,LOC107729484 coding downstream 19533 14898083 ~ 14903432 (-)
LOC103041360 NA coding downstream 27257 14886570 ~ 14895708 (-)
LOC103042079 LOC108427355,LOC108280305,LOC107729482,LOC107583001,LOC107689653,LOC107730748 coding downstream 37572 14868374 ~ 14885393 (-)
thoc6 thoc6,LOC107729483,LOC108280484,LOC107689651,LOC107730738,LOC107583000 coding downstream 59288 14850116 ~ 14863677 (-)
LOC103040755 si:dkey-16l2.16,LOC108427354,LOC107729502,LOC107658507,LOC108280555,LOC107554119 coding downstream 75106 14831261 ~ 14847859 (-)
bcl2l12 bcl2l12 coding upstream 13626 14937585 ~ 14950057 (-)
nosip nosip,LOC107658495,LOC107729514 coding upstream 80856 15004815 ~ 15013767 (-)
LOC103044148 LOC108280579,LOC108427364,LOC100007086 coding upstream 105227 15029186 ~ 15039057 (-)
LOC103041664 LOC108427365 coding upstream 122508 15046467 ~ 15087213 (-)
scaf1 scaf1,LOC107658492,LOC107583012,LOC106583916 coding upstream 175080 15099039 ~ 15112654 (-)
G10654 NA non-coding downstream 151347 14771330 ~ 14771618 (-)
G10649 NA non-coding downstream 214352 14707333 ~ 14708613 (-)
G10595 NA non-coding downstream 228071 14692782 ~ 14694894 (-)
G10561 NA non-coding downstream 616435 14306272 ~ 14306530 (-)
G10430 NA non-coding downstream 901076 14021687 ~ 14021889 (-)
G10782 polr3d non-coding upstream 95332 15019291 ~ 15020115 (-)
LOC111194139 NA non-coding upstream 163912 15087871 ~ 15089128 (-)
G10811 NA non-coding upstream 355494 15279453 ~ 15279928 (-)
G10962 NA non-coding upstream 744916 15668875 ~ 15689205 (-)
G10989 NA non-coding upstream 966114 15890073 ~ 15890647 (-)
LOC103040656 LOC108427315 other downstream 125322 14788070 ~ 14797643 (-)
hsd3b7 hsd3b7,LOC106601563 other downstream 266404 14619376 ~ 14656561 (-)
G10560 NA other downstream 679171 14241061 ~ 14243794 (-)
LOC103034594 ppp1caa,LOC103034594,LOC105897688,LOC108280818,LOC103367324,LOC101477563,LOC105894037 other downstream 839858 14038858 ~ 14083107 (-)
LOC103034410 lrrc4b,lrrc4ba,LOC103034410,LOC107680881,LOC107551155,LOC107667844,LOC107563987,LOC107732840 other downstream 1630087 13149357 ~ 13292878 (-)
LOC103043825 pax10,LOC108427317,LOC107689663,LOC108280587,LOC107557340,LOC107579793 other upstream 36873 14960832 ~ 14981569 (-)
G10808 prmt1,LOC107729532,LOC107658485,LOC107689671 other upstream 348796 15272755 ~ 15278437 (-)
LOC111188178 NA other upstream 361717 15285676 ~ 15286735 (-)
LOC103030038 kcnc3a,LOC108427388,LOC107729449,LOC107693499,LOC107548332 other upstream 834797 15758756 ~ 15902433 (-)
strada strada,LOC107693497,LOC107658471 other upstream 1055278 15979237 ~ 16004719 (-)

Expression


Co-expression Network