G10811


Basic Information

Item Value
gene id G10811
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 15279453 ~ 15279928 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU14612
TACCCTAAATGCAGACCCCCACTTCCTCCCACTCCAAACAGTGAAACTGTTTTTATGCTTAATTCTAATAAGTAAAGTTTAGGTAAAAGTTAGGCTGAAACTCTGTTCACACTTTTTGAAAATTTCCCCTCCCCTGCTTTTTTTGTAACTTAAGAAAAACACTACTCCACATTGATGTTTCACAAAAGCCATTTTTTACTAGAATATCACAGATGTCAATGATATGCCTGCCTCCTTGACCTTTATATTGACTTGTTAAAGAGCTTTTCCAGTTACTGTGACTGCTTAAGTATGTACcacagggatgggcaactggcggcccgggggccgcacacggccctcgtcatcactcagtgcggcgAATAGAtcataaataatttcataatttcataatttaaaaaaaaaaaaaaaaaaaaaacgtaattctacttttgaccgctagagcctgccaaacaaccacgaaaattgacattgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14612 True 476 lncRNA 0.30 1 15279453 15279928

Neighbor

gene id symbol gene type direction distance location
ap2a1 ap2a1,LOC103373570,LOC104937940,LOC103131521 coding downstream 9648 15228919 ~ 15269805 (-)
LOC103047588 LOC107579758 coding downstream 53934 15219759 ~ 15225519 (-)
rras rras,LOC107730736,LOC107658490,LOC107583016,LOC107554112 coding downstream 71446 15194863 ~ 15208007 (-)
prrg2 NA coding downstream 96753 15174397 ~ 15182700 (-)
prr12 prr12,prr12b,LOC107729421,LOC107658420,LOC107689691,LOC107730729,LOC107554076 coding downstream 107021 15136544 ~ 15172432 (-)
LOC103027827 syt5a,LOC108427381,LOC107658481,LOC107583026,LOC107730742,LOC107548337 coding upstream 368356 15648284 ~ 15665371 (-)
LOC103029400 LOC108427383,LOC108427382,LOC100528069,LOC108427385 coding upstream 391828 15671756 ~ 15673621 (-)
LOC103029096 LOC108427383,LOC108427382,LOC108427385,LOC100528069 coding upstream 401272 15681200 ~ 15683515 (-)
LOC103044149 LOC108427384,LOC108427383,LOC100528069,LOC108427382 coding upstream 420566 15700494 ~ 15705807 (-)
LOC103038450 LOC108427385,LOC100528069,LOC108427383,LOC108427382 coding upstream 431887 15711815 ~ 15713440 (-)
LOC111194139 NA non-coding downstream 190325 15087871 ~ 15089128 (-)
G10782 polr3d non-coding downstream 259338 15019291 ~ 15020115 (-)
G10654 NA non-coding downstream 507835 14771330 ~ 14771618 (-)
G10649 NA non-coding downstream 570840 14707333 ~ 14708613 (-)
G10595 NA non-coding downstream 584559 14692782 ~ 14694894 (-)
G10962 NA non-coding upstream 388947 15668875 ~ 15689205 (-)
G10989 NA non-coding upstream 610145 15890073 ~ 15890647 (-)
G10996 NA non-coding upstream 663429 15943357 ~ 15943893 (-)
G11000 NA non-coding upstream 671006 15950934 ~ 15951171 (-)
G11008 NA non-coding upstream 727007 16006935 ~ 16007794 (-)
G10808 prmt1,LOC107729532,LOC107658485,LOC107689671 other downstream 1016 15272755 ~ 15278437 (-)
LOC103043825 pax10,LOC108427317,LOC107689663,LOC108280587,LOC107557340,LOC107579793 other downstream 297884 14960832 ~ 14981569 (-)
G10767 NA other downstream 355494 14922965 ~ 14923959 (-)
LOC103040656 LOC108427315 other downstream 481810 14788070 ~ 14797643 (-)
hsd3b7 hsd3b7,LOC106601563 other downstream 622892 14619376 ~ 14656561 (-)
LOC111188178 NA other upstream 5748 15285676 ~ 15286735 (-)
LOC103030038 kcnc3a,LOC108427388,LOC107729449,LOC107693499,LOC107548332 other upstream 478828 15758756 ~ 15902433 (-)
strada strada,LOC107693497,LOC107658471 other upstream 699309 15979237 ~ 16004719 (-)
LOC103036671 LOC108427400 other upstream 1041650 16321578 ~ 16353834 (-)
G11719 med13,LOC108435287,LOC107586266,LOC107726096,LOC107597541 other upstream 3828785 19108713 ~ 19111572 (-)

Expression


Co-expression Network