G11116


Basic Information

Item Value
gene id G11116
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 16605038 ~ 16618039 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU15023
CTGGATTGCagcggcggaatccagctctgcagccgccatgaaagccagctcctcagcctgaggtgctggcGCTGCAGCTGCAAGGCTTGAGTGTGCGGTTGCCGCAAAATCCCGGACTGGATTTGTAATCCTGGAGAGCGGCTCAAGCACCGCAGCAGTCCCGGAGCGTGGCGTCTCAgccgcgggcttcacggagtgcgccgtctcggccgcgagagtcacggggTGCGGCTTTGCAGCCGCGAGAGTCACAGAGCGCGGCGTCTTGgccgcgggcttcacggagcgcggcgtcccggccgcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15023 True 304 lncRNA 0.50 2 16605038 16618039

Neighbor

gene id symbol gene type direction distance location
ccdc43 ccdc43 coding downstream 167913 16428104 ~ 16437125 (-)
fzd2 fzd2,LOC107583044,LOC107729561,LOC107658461,LOC107721960,LOC107564008 coding downstream 196545 16405951 ~ 16408493 (-)
dcaf7 dcaf7,LOC105030232,LOC105898766,LOC100702343 coding downstream 319145 16275677 ~ 16285893 (-)
snrnp70 snrnp70,LOC106583923 coding downstream 640562 15952844 ~ 15964476 (-)
LOC103032263 lin7b,LOC107693502,LOC107730776,LOC107658474,LOC107548331 coding downstream 662494 15936522 ~ 15942544 (-)
c1ql1 c1ql1,LOC107729572,LOC103393155 coding upstream 75383 16693422 ~ 16763105 (-)
LOC111194193 NA coding upstream 448357 17066396 ~ 17068055 (-)
LOC103042512 zgc:172282,LOC108433964,LOC107697541,LOC107758157,LOC107749639,LOC107678250,LOC107555640 coding upstream 619335 17237374 ~ 17512950 (-)
LOC111194274 NA coding upstream 1477000 18095039 ~ 18096516 (-)
LOC111194212 NA coding upstream 1608065 18226104 ~ 18229347 (-)
G11108 NA non-coding downstream 43675 16561124 ~ 16561363 (-)
G11102 NA non-coding downstream 113934 16490768 ~ 16491104 (-)
G11100 NA non-coding downstream 114812 16490025 ~ 16490226 (-)
G11094 NA non-coding downstream 121152 16483569 ~ 16483886 (-)
G11077 NA non-coding downstream 184912 16418159 ~ 16420126 (-)
G11125 NA non-coding upstream 38360 16656399 ~ 16656618 (-)
G11134 NA non-coding upstream 68290 16686329 ~ 16687516 (-)
G11137 NA non-coding upstream 141377 16759416 ~ 16760021 (-)
G11150 NA non-coding upstream 199198 16817237 ~ 16817754 (-)
G11152 NA non-coding upstream 215202 16833241 ~ 16840238 (-)
LOC103036671 LOC108427400 other downstream 251204 16321578 ~ 16353834 (-)
strada strada,LOC107693497,LOC107658471 other downstream 600319 15979237 ~ 16004719 (-)
LOC103030038 kcnc3a,LOC108427388,LOC107729449,LOC107693499,LOC107548332 other downstream 702605 15758756 ~ 15902433 (-)
LOC111188178 NA other downstream 1318303 15285676 ~ 15286735 (-)
G10808 prmt1,LOC107729532,LOC107658485,LOC107689671 other downstream 1326601 15272755 ~ 15278437 (-)
G11719 med13,LOC108435287,LOC107586266,LOC107726096,LOC107597541 other upstream 2490674 19108713 ~ 19111572 (-)
LOC103042450 dyrk1a,LOC107662773,LOC107586271,LOC107726100,LOC108435291,LOC107597536,LOC107729114 other upstream 2623717 19241756 ~ 19273854 (-)
jam3 jam3,jam3a,LOC107699899,LOC107597526,LOC107662760,LOC107713445 other upstream 3167942 19785981 ~ 19802323 (-)
G11917 NA other upstream 3380401 19998440 ~ 20082442 (-)
trnak-cuu NA other upstream 4357043 20975082 ~ 20975154 (-)

Expression


Co-expression Network