G11747


Basic Information

Item Value
gene id G11747
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 19375231 ~ 19377538 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU15883
tcttttggttttctgtgctcctgccctgttttcctgtcttgtgtttccagccatgtgcttttttgagcacatggcattgttttgttattgttctgtctccaccctagccccgccctagcccagccctagccattagtgttgtcaccttgtgtcttgtttgtaaccccgccccctcattacctgtcttcaccctccttgtgtataaatagcctCTTGTATGAGTGTTGccttgtggagtcttttgtatctttgCTGTCTGTATATccaagttttgtattttgtgaatTTATGTTCCCTGAATCcaggtctgttgttttgttaattCAGTAAGTGtacctattttattttgtgtcccTAGTGTTCtagttattcagtgttttgtttgtttagtcatACTTAGTTTTGTTCTATTCAATATTCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15883 True 423 lncRNA 0.40 2 19375231 19377538

Neighbor

gene id symbol gene type direction distance location
LOC103024090 NA coding downstream 5087 19359785 ~ 19370144 (-)
LOC103042959 LOC108435292 coding downstream 62603 19284979 ~ 19312628 (-)
trnap-cgg NA coding downstream 136254 19238906 ~ 19238977 (-)
LOC103042129 thap12,LOC108278397 coding downstream 137303 19233343 ~ 19237928 (-)
LOC103041420 NA coding downstream 144322 19217372 ~ 19230909 (-)
LOC111194225 zpld1,LOC108435272,LOC108277641,LOC107699883,LOC103038052,LOC108276676 coding upstream 5526 19383064 ~ 19397085 (-)
LOC103024404 NA coding upstream 114297 19491835 ~ 19505349 (-)
LOC103047043 lim2.3,LOC103047043,LOC108435296,LOC108277938,LOC107748598,LOC107699889,LOC107597599 coding upstream 158872 19536410 ~ 19541417 (-)
LOC103024723 LOC108435297 coding upstream 198268 19575806 ~ 19641080 (-)
acad8 acad8,LOC107582571 coding upstream 386834 19764372 ~ 19772616 (-)
G11742 NA non-coding downstream 108497 19266438 ~ 19266734 (-)
G11720 NA non-coding downstream 254072 19117942 ~ 19121159 (-)
G11712 NA non-coding downstream 281187 19091508 ~ 19094044 (-)
G11608 NA non-coding downstream 443070 18879117 ~ 18932161 (-)
G11605 NA non-coding downstream 472984 18884146 ~ 18902247 (-)
G11753 NA non-coding upstream 13765 19391303 ~ 19535599 (-)
G11763 NA non-coding upstream 75855 19453393 ~ 19475044 (-)
G11784 LOC107582617,LOC107597532,LOC100304827 non-coding upstream 153851 19531389 ~ 19532500 (-)
G11786 NA non-coding upstream 164783 19542321 ~ 19542560 (-)
G11790 NA non-coding upstream 172140 19549678 ~ 19549879 (-)
LOC103042450 dyrk1a,LOC107662773,LOC107586271,LOC107726100,LOC108435291,LOC107597536,LOC107729114 other downstream 101377 19241756 ~ 19273854 (-)
G11719 med13,LOC108435287,LOC107586266,LOC107726096,LOC107597541 other downstream 263659 19108713 ~ 19111572 (-)
LOC103036671 LOC108427400 other downstream 3021397 16321578 ~ 16353834 (-)
strada strada,LOC107693497,LOC107658471 other downstream 3370512 15979237 ~ 16004719 (-)
LOC103030038 kcnc3a,LOC108427388,LOC107729449,LOC107693499,LOC107548332 other downstream 3472798 15758756 ~ 15902433 (-)
jam3 jam3,jam3a,LOC107699899,LOC107597526,LOC107662760,LOC107713445 other upstream 408443 19785981 ~ 19802323 (-)
G11917 NA other upstream 620902 19998440 ~ 20082442 (-)
trnak-cuu NA other upstream 1597544 20975082 ~ 20975154 (-)
G12767 NA other upstream 2616269 21993807 ~ 21994751 (-)
LOC111193708 NA other upstream 4161719 23539257 ~ 23553970 (-)

Expression


Co-expression Network