CI01000009_08739549_08745500


Basic Information

Item Value
gene id CI01000009_08739549_08745500
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 8739549 ~ 8745500 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_08739549_08745500.mRNA
TGTTTGTATTATATTTTGGAGAAACAGTAATCACTTGTCTGGACAGCACTTGGCCAGCGAGTCCTGCTGTACCCTCCAGCTGCTCTCCTACATGTGGCTGTTGCACACCAGTTTCAGATGGGATGAAGATAACAGGATTTGCTTTGAGGGCTGTATGGAGCCAAAGATAGACATCAGACAAGATGGCAGAGATGAGAGGAAACAAAGCAGCCTATGGAACAGCAGAAAAGACTGGGGCAAAATAAGGCCTTTGCATCCATCACTCAGTTTGACTTCCTCCTCAATACCTGTTCTTCCTGCTGCCCATGTCACTCAGCTCAGCAAGTCTGCACCAATGCTGATGGACCCTCTTCTTGATGCTAGTGTGCTGCTGCAAGCACGGGCTAACATTCATAACAGAGACATTTACTCATATTGCCAGGAGGTTGTCCTACAGAATGGATTAAAAGAAACTGGAGAAGTCACAATCTCAGAGAACATAATCCTGACAGAAGTACCTTTAGATAGGAGGCTTAGAGGTGTTGGCACAGGGGACGACAATGACAGGCAAAAGACACCACCTACTCTCTGTTCAAGGACACCCAAGCATCTTGCTCCGTTAGACAATAAATACACGGATGGTTCTGCACGTTCAAGTCTTGAGCACCCACTGCTCTTAAAACAAAGCAGCATTTTGCCCATCTCATCACAATCCAGACGAAGATTGGAAAGGATCTCCAGCCAGTCTTTCAGAAGATCCAGAGGCACCAGAGCAGGCAGTGAAGAAAGCAACTCCTGCAGCAGTAGTAGCCAAGAAGAGGACGAGACTGTGCCTCAAGATGCACACAAGATACATGTGGGATTAGAGAAGTCACTGAATTTGGAATTAGGGACCTATTTGGATTTTCAGGATTTAGTCAGTTCTGTAATTAACAATACCACAAAAGATAAAAACAATGTAATTTCATACAACAGTAAAGGCTGTGCAGCTATCGAATCATTGACTGTTAGGGAGGTTGAGGCTAAAACGAGATGCAAGTCTTTCAAAACAACAAAGGATCTTCAAGAAAAGTGTCCAACTATGGACTGCTGCTCTGTTGCTGAAGGACACAACAGCATAGTCAGAGAAATACAACCTATTGTCAGAGAATCGTGTTTTATCGCAGGTGAGAAGCACCTCACCACTGTGGATATTAGTGTAGTAGAACCAACTACACATGAAAAGAACAAACCAGTTAAGATAACCAAAGGAAATGACAGGAAAGGTAAAACATCTATTCAGACAAATCAGTCATTCAATGTTCTGGCACACAGAAATCAAAGTACTGTTAAAACTACAAGGAACAGGATAAATTCACCAATTCAATCAAAGCTGCAGCTTAGAGAAAGTAAACCCACAAGCCTAGCAATTGGAGGAGAGACTACTAACAAATATCTGCCAAGAGCACCTACAATGGCTTGCAAAAAAACTGCAGATGAAGCCTCAACAACAAGAAGAGTCTCTGAACCTTTTCAGCACATGAGGTCAAGTGACGACAAGAAAGTAAGCAATTACAGTCAAAAGCAAATTCACAGAGATCCGAGAAGTGCAAGAGCATCTAAAAAGCCTGCATCAGGAGCAGCACAGCGAGCAAGGTCTGCTGTCGATTATGTCACTTACAATGACATGTTTCTGAAGATCAGTCAGGGAGATGAAGGTCCAGCAATCTATGAAATGTTTGCAACTCCAATTTATGAAAATCTTAGAGTAGACAGTTCTGCAGAGAGATCCAGACAGGTTCATACAGCGCTTCAAGTTAAAAGACAGATAAATGGAAAACTGAGGGGCCAAAAAACAGTGGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_08739549_08745500.mRNA True 1822 mRNA 0.43 6 8739549 8745500

Neighbor

gene id symbol gene type direction distance location
CI01000009_08737485_08739374 MAP3K19 coding downstream 175 8737253 ~ 8739374 (-)
CI01000009_08718943_08719773 NA coding downstream 17455 8718807 ~ 8722094 (-)
CI01000009_08700152_08716708 NA coding downstream 22475 8700120 ~ 8717074 (-)
CI01000009_08683782_08694491 NA coding downstream 44128 8683680 ~ 8695421 (-)
CI01000009_08545736_08549056 NA coding downstream 190493 8545556 ~ 8549056 (-)
CI01000009_08842201_08845751 MMADHC coding upstream 96611 8842111 ~ 8845751 (-)
CI01000009_08858198_08860555 NA coding upstream 110810 8856310 ~ 8860563 (-)
CI01000009_08870258_08879256 NA coding upstream 124699 8870199 ~ 8879256 (-)
CI01000009_08882412_08884827 EAF2 coding upstream 136016 8881516 ~ 8885373 (-)
CI01000009_08930289_08935481 TSN coding upstream 184420 8929920 ~ 8935790 (-)
G56929 NA non-coding downstream 25522 8712932 ~ 8714027 (-)
G56912 NA non-coding downstream 64135 8668715 ~ 8675414 (-)
G55948 NA non-coding downstream 142437 8596854 ~ 8597112 (-)
G55919 NA non-coding downstream 146248 8592927 ~ 8593301 (-)
G56940 NA non-coding upstream 14141 8759641 ~ 8766277 (-)
G56942 NA non-coding upstream 21911 8767411 ~ 8768925 (-)
G56943 NA non-coding upstream 23818 8769318 ~ 8774402 (-)
G56977 NA non-coding upstream 78121 8823621 ~ 8861192 (-)
G56946 NA non-coding upstream 117566 8863066 ~ 8869192 (-)
G55814 NA other downstream 311537 8425821 ~ 8428012 (-)
G53515 NA other downstream 3234301 5502395 ~ 5505248 (-)
G52828 NA other downstream 4508080 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 5477592 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 5840142 2883688 ~ 2893975 (-)
G59097 NA other upstream 3542717 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 5229888 13975099 ~ 13978614 (-)
G59490 NA other upstream 5288064 14033564 ~ 14037873 (-)
G59811 NA other upstream 6116897 14862397 ~ 14887464 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037123 map3k19 coding NC_007120.7 CM002893.2 23224761 ~ 23231203 (+)