G12492


Basic Information

Item Value
gene id G12492
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 21992343 ~ 21993142 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU16792
agaagtagagagagtgagaaatatagaagtagagagagagagtgagaaatagagacgtagagagagagtgagaaatagagacgtagagagagagtgagaaagagagagtgagaaatagagacgtagagagagagtgagaaatagagacgtagagagagagtgagaaatagagaagtagagagagtgagaaatagagaagtagagagagagtgagaaagagagagtgagaaatagagaagtagagagagagtgagaaagagagtgagaaatagagaagtagagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16792 True 286 lncRNA 0.38 2 21992343 21993142

Neighbor

gene id symbol gene type direction distance location
ankk1 NA coding upstream 36499 21938389 ~ 21955844 (+)
LOC111194280 NA coding upstream 61039 21919218 ~ 21931304 (+)
ttc12 NA coding upstream 86948 21844765 ~ 21905395 (+)
LOC111194279 NA coding upstream 164961 21764958 ~ 21827382 (+)
LOC103031614 ppp2r1b,LOC104918016 coding upstream 394991 21574950 ~ 21597352 (+)
LOC111194234 NA coding downstream 316210 22309352 ~ 22318452 (+)
LOC103037938 LOC108436505,LOC108278373,LOC107601688,LOC107586299 coding downstream 359227 22352369 ~ 22391001 (+)
LOC103038252 LOC108277474,LOC103353371,LOC107709113,LOC108436507 coding downstream 413237 22406379 ~ 22435434 (+)
LOC103034910 tmem136,LOC108436527,LOC107709136,LOC107586230,LOC107657235,LOC107601721,LOC107696007,LOC107717274 coding downstream 528100 22521242 ~ 22529283 (+)
LOC103038567 LOC108436528 coding downstream 540537 22533679 ~ 22614509 (+)
G12483 NA non-coding upstream 7491 21937741 ~ 21984852 (+)
G12470 NA non-coding upstream 92623 21899470 ~ 21899720 (+)
G12445 NA non-coding upstream 250039 21741857 ~ 21742304 (+)
G12424 NA non-coding upstream 275954 21679840 ~ 21716389 (+)
G12428 NA non-coding upstream 306401 21685357 ~ 21685942 (+)
G12496 NA non-coding downstream 37298 22030440 ~ 22082671 (+)
G12497 NA non-coding downstream 46711 22039853 ~ 22066354 (+)
G12502 NA non-coding downstream 70342 22063484 ~ 22065919 (+)
G12503 NA non-coding downstream 70402 22063544 ~ 22065122 (+)
G12513 NA non-coding downstream 136037 22129179 ~ 22131000 (+)
G12362 bco2b,LOC108436497,LOC107586303,LOC107657247 other upstream 528694 21459850 ~ 21463649 (+)
LOC103033739 gkup,LOC108436512,LOC108278261,LOC106612544,LOC105024033,LOC107709108,LOC107717281,LOC107657260,LOC107586304 other upstream 1002279 20963049 ~ 20990064 (+)
trnan-guu NA other upstream 1016066 20976204 ~ 20976277 (+)
LOC103043893 picalmb,LOC108435293,LOC107726102,LOC107662770,LOC107597534,LOC107729110,LOC107699893,LOC108278317,LOC105903807 other upstream 2547512 19412807 ~ 19444831 (+)
LOC111194200 NA other upstream 4848995 17139425 ~ 17143348 (+)
spa17 spa17,LOC107709112,LOC107586300,LOC107657238,LOC107717271 other downstream 307854 22300996 ~ 22384972 (+)
oaf oaf,oafa,LOC107696006,LOC107709135,LOC107586231,LOC107657251,LOC107717291 other downstream 480510 22473652 ~ 22517780 (+)
G13067 NA other downstream 1860856 23853998 ~ 23855353 (+)
ccdc9 ccdc9,LOC107548566,LOC107664938 other downstream 2707700 24700842 ~ 24722676 (+)
G13237 NA other downstream 2862791 24855933 ~ 24857022 (+)

Expression


Co-expression Network