G13481


Basic Information

Item Value
gene id G13481
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 25061710 ~ 25062064 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU18104
TTTTGGTCTCCTGAAGGTGCAGACTGTGACGCCAGACGACGTCTTTTTTCTGACGTCTTCTGCACGTCCAGTATTGACGTCCCCCAGACCTCCGGATAAGGGCTAATTCTAGTTTAAATTAAGTCGTTGTGGACGTCTTTTCTACGTGAAATTTACATGTATACGTTTTATAGACCAACTACTTTGAGGCTCCCTGCATAACTGTAGTGCCATTTCAGACGGTGGCAACTGTTCCATTGTTCCAGCTTCAGCAGTTAACTGGAAACGCATACAAAGCTAAGCCAAACAATTACTGGAACAGGTTCACAACCTTCTGGAACTAGTTATGCACGTTAGTTATACACAATATGCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18104 True 355 lncRNA 0.47 1 25061710 25062064

Neighbor

gene id symbol gene type direction distance location
LOC103033355 abcg1,LOC108426925,LOC107684024,LOC107561305,LOC107755138,LOC108277612,LOC107677096 coding downstream 22908 25006992 ~ 25038802 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044 coding downstream 57799 24987066 ~ 25003911 (-)
ppm1d ppm1d,LOC107548567,LOC107743648,LOC107664959,LOC107685067,LOC107723873,LOC107562958 coding downstream 362250 24690075 ~ 24699460 (-)
brip1 NA coding downstream 374532 24567591 ~ 24687178 (-)
nlrx1 nlrx1 coding downstream 1114332 23928815 ~ 23947378 (-)
rnf169 rnf169 coding upstream 623 25062687 ~ 25072518 (-)
LOC111193727 NA coding upstream 157145 25219209 ~ 25225815 (-)
LOC103046310 NA coding upstream 581282 25643346 ~ 25660463 (-)
nudt8 nudt8 coding upstream 611808 25673872 ~ 25680956 (-)
maml2 maml2 coding upstream 766859 25828923 ~ 25905572 (-)
G13477 NA non-coding downstream 16401 25045106 ~ 25045309 (-)
G13476 NA non-coding downstream 18194 25043240 ~ 25043516 (-)
G13444 NA non-coding downstream 68187 24991921 ~ 24993523 (-)
G13427 NA non-coding downstream 92879 24968292 ~ 24968831 (-)
G13419 NA non-coding downstream 252639 24775808 ~ 24809071 (-)
G13483 NA non-coding upstream 14122 25076186 ~ 25083642 (-)
G13492 NA non-coding upstream 57783 25119847 ~ 25120476 (-)
G13515 NA non-coding upstream 168918 25230982 ~ 25231843 (-)
G13516 NA non-coding upstream 171627 25233691 ~ 25233970 (-)
G13524 NA non-coding upstream 232503 25294567 ~ 25298212 (-)
spcs2 spcs2,LOC107677086 other downstream 5609 25050960 ~ 25056101 (-)
G13322 phykpl,LOC108439974,LOC108277665,LOC107585546,LOC107743705,LOC107683819 other downstream 1152939 23904183 ~ 23908771 (-)
LOC103035686 kmt2a other downstream 1208412 23784471 ~ 23853298 (-)
LOC111193708 NA other downstream 1507740 23539257 ~ 23553970 (-)
G12767 NA other downstream 3066959 21993807 ~ 21994751 (-)
G13630 atp1b3b,LOC108277440,LOC107680094,LOC107704304,LOC107720962,LOC108426936,LOC107563006 other upstream 411670 25473734 ~ 25496958 (-)
LOC111193738 NA other upstream 461723 25523787 ~ 25524603 (-)
G13677 rnf168 other upstream 662849 25724913 ~ 25726156 (-)
nars2 nars2,LOC107670421,LOC107740380,LOC107724941,LOC107699825 other upstream 940267 26002331 ~ 26016396 (-)
G13960 dscaml1 other upstream 1608055 26670119 ~ 26698793 (-)

Expression


Co-expression Network