G13629


Basic Information

Item Value
gene id G13629
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 25414532 ~ 25506044 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU18305
TCATGTTTAAAATCTCCTTTATTTGAAGTTGTTCATACAGATCTTAAGGCATCTTCACAAAGTACAGTTTCTGCAGAGGTTTTAAAAAATCACTTCCTTCAGATGGCAGATGGATTTGAAAACAAGGTTGATAaacatttttggtgtttttcctcACCCTTCCCTCtcattagaacatttctcaaaaaatcttaaattacagttcttattatatatatatatatatatatatatatatctatatccatctatctatatatatattcatatgtaACATATCATAACCTTGTTTTCTTACAGCGGTCAGACATTGTGAGTGATAACAGGAAAAAGTGtctttaaatccattaaatatgtACAGAGAGACTTCACATCATggcacacgcatacacacacacacacacacacacacacacacacacacacacact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18305 True 431 lncRNA 0.43 2 25414532 25506044

Neighbor

gene id symbol gene type direction distance location
LOC111193727 NA coding downstream 188717 25219209 ~ 25225815 (-)
rnf169 rnf169 coding downstream 342014 25062687 ~ 25072518 (-)
LOC103033355 abcg1,LOC108426925,LOC107684024,LOC107561305,LOC107755138,LOC108277612,LOC107677096 coding downstream 375730 25006992 ~ 25038802 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044 coding downstream 410621 24987066 ~ 25003911 (-)
ppm1d ppm1d,LOC107548567,LOC107743648,LOC107664959,LOC107685067,LOC107723873,LOC107562958 coding downstream 715072 24690075 ~ 24699460 (-)
LOC103046310 NA coding upstream 137302 25643346 ~ 25660463 (-)
nudt8 nudt8 coding upstream 167828 25673872 ~ 25680956 (-)
maml2 maml2 coding upstream 322879 25828923 ~ 25905572 (-)
gab2 gab2,LOC107561751,LOC107593477 coding upstream 406555 25912599 ~ 25998864 (-)
tenm4 tenm4 coding upstream 542817 26048861 ~ 26299928 (-)
G13553 NA non-coding downstream 31145 25382194 ~ 25383387 (-)
LOC111193731 NA non-coding downstream 54077 25359664 ~ 25360455 (-)
G13537 NA non-coding downstream 57044 25357028 ~ 25357488 (-)
G13524 NA non-coding downstream 116320 25294567 ~ 25298212 (-)
G13516 NA non-coding downstream 180562 25233691 ~ 25233970 (-)
LOC111193737 NA non-coding upstream 8671 25514715 ~ 25569523 (-)
G13685 NA non-coding upstream 249897 25755941 ~ 25758034 (-)
G13769 NA non-coding upstream 465361 25971405 ~ 25975983 (-)
G13801 NA non-coding upstream 805391 26311435 ~ 26311750 (-)
G13963 NA non-coding upstream 1170727 26676771 ~ 26677906 (-)
spcs2 spcs2,LOC107677086 other downstream 358431 25050960 ~ 25056101 (-)
G13322 phykpl,LOC108439974,LOC108277665,LOC107585546,LOC107743705,LOC107683819 other downstream 1505761 23904183 ~ 23908771 (-)
LOC103035686 kmt2a other downstream 1561234 23784471 ~ 23853298 (-)
LOC111193708 NA other downstream 1860562 23539257 ~ 23553970 (-)
G12767 NA other downstream 3419781 21993807 ~ 21994751 (-)
LOC111193738 NA other upstream 17743 25523787 ~ 25524603 (-)
G13677 rnf168 other upstream 218869 25724913 ~ 25726156 (-)
nars2 nars2,LOC107670421,LOC107740380,LOC107724941,LOC107699825 other upstream 496287 26002331 ~ 26016396 (-)
G13960 dscaml1 other upstream 1164075 26670119 ~ 26698793 (-)
fam109a LOC108415891 other upstream 1318812 26824856 ~ 26833613 (-)

Expression


Co-expression Network