fam214b (fam214b,LOC102776582,LOC107684984,LOC107595918,LOC107672624)


Basic Information

Item Value
gene id fam214b
gene name fam214b,LOC102776582,LOC107684984,LOC107595918,LOC107672624
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 27023495 ~ 27038746 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU18940
gagctcaCAGAGTGCTCTCGCTCGTCCAGGAGACTGAAGGCTGGATCTCGCCTCAAATCtcgTCAGCTGCGGAGCGGCCGCCGCACCGACACCAGCCGGACCTGTTCCGGATCATCCCTGGCCTCCATCAGCAGAGCTCTGCTCGGAAACTTTGAGgagtcgATCCTGAAGGGCCGTTTCTCTCCGTCGGGGAGGATAGAGGGATTCACGGCTGAAATTGGAGCGAGCGGCTCGTACTGCCCTCAACACGCCACTTTACCTGTGCAGGTGACTTACTACGACACGTCCGAGCACAGCGCCCCTTCGCCTTTCCTGGGTGTGATCTCCCTGGAGCCGCTGGGAAAGAAAGGCTATCGGCGTACCCAAAGCAGGGACCATTCAAGTGACCTTATTCAACCCTAATAAAACTGTGGTGAAGATGTTCCTGGTGACCTACAACTTCGGGGACATGCCTGTCAATCACATGACCTTCCTGCGCCATCGCATCTTCCTGGTGCCTGTGGAGGAAGGGGAGGGGTCAGGGGAGGGGCCAGAGAGCTCCGCCCCTGACCGGAAGAAGATCCTTTGCTACCTGATACACCTGAGaTTCCAGAGCTCTAAATCTGGAAAGATTTACTTGCACAACGATATCCGGCTGCTATTCTCCCGCAAATCCATTGAGGTGGACACAGGGATTCCTTATGAGCTGAAATCTTTCACCGAGGTGCCAAGAAACCCCAAATACTCCCCGCGAGTGTGACTCTCCCCCCACCCTTTCCCACTAGAATAAAAAATCCACCatgcaaaaagagagagagagagtgatgggcGCAGAAGGACAGAGTGATAAAACCAGACTTTTAGGACGGACAGAACCACACACACTTGAAAGACTGATCTAACGCACACAGAACACACGCGAGTATCACGCTGTCTGACTGACGGACTCTCTGATATGAGGGTGTAACATGCATGCCTTGTGACTAAAGAGTTTTCCTCTAGTGCCGTTATTCACTTTGCCCTTCAGTCTGCCTGCACCGGTCATGGCCAATCAGACGCCAGCACCTATAGGACCTCGTCTGCGTGGAACTGGTCGGATTGCTGCCCTTTGTTCGGCCAATAGGAGTGCAGGaatggaggagtggaggagtggaggacgGACAGTTGAGAagatgaagtgtggagctaagAGTTGTAGGTTTGAGAGATGAAGTTGAGGGTCTGGGATTAGAGCAGATCTGGCTGCAGAAAAATGAGCTTCTAGATTAGGGGTTCTTAACCTTTCTCACTTTTTAGGGGTCaagctgcttctccatcagcagccggagtctgagagagagtatagTAGGTCATACTACTTCTCCAGTAGCATGTAGTAGCAGTACTccttaattaattacaattgatGACAGTTTGAGGCTAACTTTGAAAATAGACAGAAAATgggtgtacatttttttttcatttactaaaaaattaaataatgaatctTCTAGtgaatttcagatttttcccttttttcatcTGATGATATAAttcaatttacttttttttcacataaaaatacagtataataataagtattttaatgcatttataatgaatGCCAAAGTGAATATTACCCAACAATATAACTTAAAATGTAAATCTCATATACATAGAAGCATTTAGTAAGTATACAGGGCAGAATATGAGCTGTAAAATGCATTTCTGGGCCTCCAGCTTGTTAGTAGAGGGTAGGTTATTGTATATTTgcataaaggaaaaaatattacatagtGTACCTTTAAAGTTTGGTTGTGAGGtgcagaaatgaagaaaaactaaacaggaaaaatggaagaaaatcatactaaatagaaaaaaataatttttacacccaatttttttatttttatttagcgtAAAATGGTCTAATTCAATGAAAAGTCCGAATCTGATCCTTCATAGAGTCCCCTTGGAAGTTGCAACCCCCAGGTTAAGAACCCCTGCTCTAGACCAGGTTAGCATAGGCTAATCACCTGTTATGCTAATTATATTAGCTGGCCAGTTTGTTTACAGAGCAGTTTAGAGAAGGAACCCAATCAGTTTTAAGCCTAAAGGACAAAGAACGTTCCAGAAAGAAGGAAAGCAGCCAGAAGATTGAGAAAGAGATAAGATTCCTCCACTGGAGCGTCGCTATATCGAGCCGATACAGCAGAGAGAGGGGGGGTGGAGGAGGGTAGTAAACAGTGTGTGTAAGCAGAGGGGAGGGCactgatattttaaagtaatttaataattcTGTTATAAACAGGTCGACTCGGGAGCTATAAAACGCTACAAAACCGGGGTTTAAATGCTAATCAGGAGCACAGTGCACtgcaacaacaacacacactttcaaacaAGAGATTTCCagttaaaacagacaaaaaaaattacattttcaacaAATTAGTGGATTCAGAAGAAGTCCAGGAGCAGCTCACCTGTTTCTGA
>XM_022675759.1
ccagtatatatatacagtactagtaCTACCCTGTTGGTTCCTCTATGCTGGATATAAAATGAGATTGAGAcggttgggtttggaggttctacaggttctgtatggatcctgcagcacatttacccacagatgttgctacagctgggcctgtagatcctgtagctctacactcgtaggtttaGCTGAAGCTGAGTCCCAGCagctccataaatgctggattggtgataaatctggagatctgcaggacgaggaagtgctgcaatctggtggagactgtgttcctgggaaacccttgctgtgtgtgggtgaacattatcctgctgaaaaatgctgctgctatcaGCTGGAAGAAGTTCTGCAGGAGAGAAAGCAGCAACACATggatctgcaggatgttctgcacagatcactgagatcactGCCGTGGTCTCTGGAATGCCTTGCTCACAATGCAGCCGTTGAGCAACCAGTCAACTTCAGGAGCCCAGGAGGGCTGTGATTGGCCGTTGGCCGTGTGTGGGTGGAGCTCGAGGATAGACTTTAACTGTGCATTGGGTTGTTCAACAAgaccccacccactgcactgacACTCCGCCCCTTGGCCTTTGTCCTCTGCCTGTGGGAATGCTGTTGGTGGATTGGTGGGGACAGCGTAGGAGATGGCCATACTTGGGGCCTAGGGTCAGGGTCAAAGGGCAGGGGTGGGTCAGCAGTGTGGGGATCACAGGTCGATGTGGACGAGCCTAAATACAACCGAGGAACAACAGGCGCAcgtGCTGTGCAAAGCATTATGGGTAACGTAGTGCACCACTCCTAGAGCAGACCTCTGGGATCTGAGATCTTCCAGCTTCCGGAGCCTGTTTTCCTTCACAGGCTCGTTTTTACTGTGTAGAACAACACAGAACTCTCTAGAACTtttgaaatattaaattatcGCACAACGTCTCGCTgtttttaaccaatcagagcgcGCAGCGCAGCAGCATGCGCCACATCCACGTGGAGCTGGTGCGAAAGGAGCCGGCGCAGGCCGGGACCGACCCCGGGCTGCAGGGAGCGGGGCCTCGGCCCTTCAGCCAGGATGAGCTGCGGCTGCAGAAGGTCTACCAGCTGTCCATCTTCTCTCAGAGGGGGGGCTTCGGGGAGAGCCGGGCATCGCTCAGGCCGGGCATGAAGCGCCCCCTGCAGGACGAGGAGGAGGACGGCGGTGACGATGATGAAGAGGAAGGGGAGGTGTTGTGTGGGGCGGGTCCTGTGACGGATCCGCTCTACCTGAGAGATATGGAGACGCCGAGGTCGCCAAAGTCACCAAGGTCGCCGAGGTCACCTGCCCTCTCCCCCACGCATGCACACGCCCCCCCGGTGCCAGGCCGAAAACCCACCCAGCGCAACACCGACCGCCCCGTCCCGGACGCCTTCGCCCCCCTGTCGCCCAAATCACCACCCATGCTGGACCCCCACTCGCCCTGGGGCAGCCGACTGTGTCACAGgcGTAACTCTGAAGAGGCACAGCCGAGTAGTGCGTGTCACAAGCGCCCCCTTCTGGATGAAGAGTCAGAGGGCGATAAAGAACTCGATGGGGATTTTTCAAGAGATTCAGAGACGTGCCGGTCGCCCCGTTCACCACGCTCACCCCGCTCCCCGTCCCTGtcccccacccacccacataCCCACCCGGTCCTGGGCCGAAGACCCGCCCAGCGCACCCTGGACTGCCCTGTCCGGACGCTTTTGCCCCCCTGTCCCCTAAATCACCCCCCATGCTGGACCCCATGCAGTCCCCGCCCCACGCAGTGCCCTCCCCCCGGACTCGGGCGTCCACCGCTGGAGGCGCCGCCGTGCCCTGTGGACGGGTCCAGAGACGAGGGCTGCAGTACCAGCGTCCTGCCAGTAGAGGCCCTGTTGAGCTCTTCATGTAATCTGGAGCTTCAGGGAGCTTTACGGCCGCCGCTGACTCCGGCTGAGGCTGTCCAATGGGCAGCCAGTATTGAGTCATCCCCGCCCCCTCCGGACAGGAAGTCTCCAAGCTCATCTTCACCCCCTTCCTGGTCTAACGGGACAAGTCCATCAGATAAAACATCCGATCCCCCCCGGGCGATTCTGGGGGTGAAGAAGAAGCTGCTGTCCTCCAGTGATACTGGAGAGTCGTGTTCGGAGGACGAGGGCCCGTCCACGTCCAAACGAAGCCGCATGGCCCTGCTGACGCCCGGCCTGGGGCTGGCCGCCGGACGCAGCACCGACTCCAAGGCCGCCCCCTACTGGACACACCTGCTGCCCGCGGCACGAGAGCAGGGCAAGGTGAGCTTTAGCAACACGctcaCAGAGTGCTCTCGCTCGTCCAGGAGACTGAAGGCTGGATCTCGCCTCAAATCtcgTCAGCTGCGGAGCGGCCGCCGCACCGACACCAGCCGGACCTGTTCCGGATCATCCCTGGCCTCCATCAGCAGAGCTCTGCTCGGAAACTTTGAGgagtcgATCCTGAAGGGCCGTTTCTCTCCGTCGGGGAGGATAGAGGGATTCACGGCTGAAATTGGAGCGAGCGGCTCGTACTGCCCTCAACACGCCACTTTACCTGTGCAGGTGACTTACTACGACACGTCCGAGCACAGCGCCCCTTCGCCTTTCCTGGGTGTGATCTCCCTGGAGCCGCTGGGAAAGAAAGGCTATGGCGTACCCAAAGCAGGGACCATTCAAGTGACCTTATTCAACCCTAATAAAACTGTGGTGAAGATGTTCCTGGTGACCTACAACTTCGGGGACATGCCTGTCAATCACATGACCTTCCTGCGCCATCGCATCTTCCTGGTGCCTGTGGAGGAAGGGGAGGGGTCAGGGGAGGGGCCAGAGAGCTCCGCCCCTGACCGGAAGAAGATCCTTTGCTACCTGATACACCTGAGaTTCCAGAGCTCTAAATCTGGAAAGATTTACTTGCACAACGATATCCGGCTGCTATTCTCCCGCAAATCCATTGAGGTGGACACAGGGATTCCTTATGAGCTGAAATCTTTCACCGAGGTGCCAAGAAACCCCAAATACTCCCCGCGAGTGTGACTCTCCCCCCACCCTTTCCCACTAGAATAAAAAATCCACCatgcaaaaagagagagagagagtgatgggcGCAGAAGGACAGAGTGATAAAACCAGACTTTTAGGACGGACAGAACCACACACACTTGAAAGACTGATCTAACGCACACAGAACACACGCGAGTATCACGCTGTCTGACTGACGGACTCTCTGATATGAGGGTGTAACATGCATGCCTTGTGACTAAAGAGTTTTCCTCTAGTGCCGTTATTCACTTTGCCCTTCAGTCTGCCTGCACCGGTCATGGCCAATCAGACGCCAGCACCTATAGGACCTCGTCTGCGTGGAACTGGTCGGATTGCTGCCCTTTGTTCGGCCAATAGGAGTGCAGGaatggaggagtggaggagtggaggacgGACAGTTGAGAagatgaagtgtggagctaagAGTTGTAGGTTTGAGAGATGAAGTTGAGGGTCTGGGATTAGAGCAGATCTGGCTGCAGAAAAATGAGCTTCTAGATTAGGGGTTCTTAACCTTTCTCACTTTTTAGGGGTCaagctgcttctccatcagcagccggagtctgagagagagtatagTAGGTCATACTACTTCTCCAGTAGCATGTAGTAGCAGTACTccttaattaattacaattgatGACAGTTTGAGGCTAACTTTGAAAATAGACAGAAAATgggtgtacatttttttttcatttactaaaaaattaaataatgaatctTCTAGtgaatttcagatttttcccttttttcatcTGATGATATAAttcaatttacttttttttcacataaaaatacagtataataataagtattttaatgcatttataatgaatGCCAAAGTGAATATTACCCAACAATATAACTTAAAATGTAAATCTCATATACATAGAAGCATTTAGTAAGTATACAGGGCAGAATATGAGCTGTAAAATGCATTTCTGGGCCTCCAGCTTGTTAGTAGAGGGTAGGTTATTGTATATTTgcataaaggaaaaaatattacatagtGTACCTTTAAAGTTTGGTTGTGAGGtgcagaaatgaagaaaaactaaacaggaaaaatggaagaaaatcatactaaatagaaaaaaataatttttacacccaatttttttatttttatttagcgtAAAATGGTCTAATTCAATGAAAAGTCCGAATCTGATCCTTCATAGAGTCCCCTTGGAAGTTGCAACCCCCAGGTTAAGAACCCCTGCTCTAGACCAGGTTAGCATAGGCTAATCACCTGTTATGCTAATTATATTAGCTGGCCAGTTTGTTTACAGAGCAGTTTAGAGAAGGAACCCAATCAGTTTTAAGCCTAAAGGACAAAGAACGTTCCAGAAAGAAGGAAAGCAGCCAGAAGATTGAGAAAGAGATAAGATTCCTCCACTGGAGCGTCGCTATATCGAGCCGATACAGCAGAGAGAGGGGGGGTGGAGGAGGGTAGTAAACAGTGTGTGTAAGCAGAGGGGAGGGCactgatattttaaagtaatttaataattcTGTTATAAACAGGTCGACTCGGGAGCTATAAAACGCTACAAAACCGGGGTTTAAATGCTAATCAGGAGCACAGTGCACtgcaacaacaacacacactttcaaacaAGAGATTTCCagttaaaacagacaaaaaaaattacattttcaacaAATTAGTGGATTCAGAAGAAGTCCAGGAGCAGCTCACCTGTTTCTGACTGGGGCTGAAAAAAAGA

Function

symbol description
fam214b Orthologous to human FAM214B (family with sequence similarity 214 member B).

NR:

description
PREDICTED: protein FAM214B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18940 False 2460 TUCP 0.42 6 27023513 27029917
XM_022675759.1 True 4790 mRNA 0.52 14 27023495 27038746

Neighbor

gene id symbol gene type direction distance location
ranbp1 ranbp1,LOC107752129,LOC107684983 coding downstream 4153 27009547 ~ 27019342 (-)
golga3 golga3 coding downstream 15615 26983884 ~ 27007880 (-)
ankle2 ankle2,LOC102797792,LOC102795364 coding downstream 40886 26972252 ~ 26982609 (-)
poli NA coding downstream 64663 26947658 ~ 26958832 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323 coding downstream 77292 26939843 ~ 26946203 (-)
LOC103032722 LOC107690236,LOC108276491,LOC107733827 coding upstream 89852 27128598 ~ 27319845 (-)
LOC111193779 LOC108436637 coding upstream 371133 27409879 ~ 27507368 (-)
LOC103029886 LOC107738631 coding upstream 511563 27550309 ~ 27569402 (-)
alg1 alg1 coding upstream 539017 27577763 ~ 27589298 (-)
LOC103033698 LOC108436663,LOC108256318,LOC105900006,LOC106596483,LOC107738612 coding upstream 565826 27604572 ~ 27629246 (-)
G14125 NA non-coding downstream 58802 26963642 ~ 26964693 (-)
G14112 NA non-coding downstream 60930 26937876 ~ 26962565 (-)
G13963 NA non-coding downstream 345589 26676771 ~ 26677906 (-)
G13801 NA non-coding downstream 711745 26311435 ~ 26311750 (-)
G13769 NA non-coding downstream 1047512 25971405 ~ 25975983 (-)
G14130 NA non-coding upstream 6762 27045508 ~ 27046047 (-)
G14131 NA non-coding upstream 8123 27046869 ~ 27047115 (-)
G14128 NA non-coding upstream 72442 27111188 ~ 27125507 (-)
G14152 NA non-coding upstream 388056 27426802 ~ 27430492 (-)
G14156 NA non-coding upstream 420137 27458883 ~ 27462491 (-)
G14113 NA other downstream 120782 26899005 ~ 26902713 (-)
fam109a LOC108415891 other downstream 189882 26824856 ~ 26833613 (-)
G13960 dscaml1 other downstream 324702 26670119 ~ 26698793 (-)
nars2 nars2,LOC107670421,LOC107740380,LOC107724941,LOC107699825 other downstream 1007099 26002331 ~ 26016396 (-)
G13677 rnf168 other downstream 1297339 25724913 ~ 25726156 (-)
carhsp1 carhsp1,LOC107733846,LOC107576530,LOC107738622,LOC107590589,LOC107690249 other upstream 1710788 28749534 ~ 28796458 (-)
emp2 emp2 other upstream 2574740 29613486 ~ 29643303 (-)
dexi dexi,LOC107590611 other upstream 2718941 29757687 ~ 29761252 (-)
LOC111193878 NA other upstream 2850053 29888799 ~ 29892305 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other upstream 3222272 30261018 ~ 30268350 (-)

Expression


Co-expression Network