G14425 (cunh16orf72,LOC103025273,LOC105900007,LOC107685917)


Basic Information

Item Value
gene id G14425
gene name cunh16orf72,LOC103025273,LOC105900007,LOC107685917
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 29007032 ~ 29011028 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19354
AATAATTTATGAACAGGTCTGTGGCAGAGTGCTGTAAacgtcacaatttttttttgtttgtgcgaCAAAAATTCAGAACTGCGGTATGAACCGCAGCCCCTAGATGTTTTCAAGGACAGCTAAATTATCTCTGTGTTGAGACAAAGTCCAAAAACAACATTACTGGGTCCTACATGAACTGTACAGACGCGGTAGTGTTATCAAATGaacacaaagaacaaagaagagaagaaaaatagTAGTGATGGATGCAACCACATCGGTGTACAGCATTTAACGTGGGGCAAATCATTaacaaaacattatattaaCATAAATAACCAAGTTTACGTTTaaattctattttcttttttaacatcaACAATTAAGCTCTCTGTTTTGTACTGAAACTAATTATAccaaattattttactgttttttttttttttttttgcttcacgTCACACTAACAGCTAAatgtttctcaaaactctaaattTTCCACAAACAAAACTGAATTTGAATAGTACTTGAATTTGTTAACTTTAGTGGTTTAAAGAGGTTTAATTCCCAAAGTTCAAGACTCTTCAGATCCAGAGGACTGCACTGACTTCAGTCTGCCTGGTTGTAAATGTGAATCTGAAATTCGTATTCGAAATCTGAAGCGTCCAGCGTCCGGTCCAGGCAGTCCTCGGCTTCGTACTTTTGAGAAACACGTTTAAAGGACACTTCAAATTTAAGCCAACACAGGTTTCTGGTCATCAgtaatctcctctgaagaggtGGCTCGTCCTTAACTTCGTTAACTTTGTTGTGTTGCACTCTTGACACATGGTTTCGAGCCAGGGACCTGCCACTTCAAGCCATGTAATATAAACATCAATAATTGCACTAAACGTACGCTCCTCTGGTGCGTTTCCTTCTTTCAGTGGTTTTAGTGCAAGATCTTTGCTTCCACAAATCCACAAACGCTTCTTCAGTCCACAGCAGCTTGGAAATAAGACTGATTTTGCACTCTGTCCATTAATACTCCAGCTGAATAGAACACATCAGAACAGAACGGCCATGATAGAAGAACAAAGGCAAGATGAATAATATATTAAAGTGACTTTTGTAACTAGATAGCCAGTCAGGAGAGTCCAGGAGTCGAGGGTTCAGCCCACACGGTGTGGTGAAAGCAAGCAATCAGTGACGGAAGTGAAAATACTGTCAGTCAATCAACACCAGCTCCAGTAGGTCCAATCTGGATCAAACTCCAGCCTTGTGGAAGCACATGTCTGGCCAGTTCACTTAAAATGTCCAACTAGCCTTATAAGGGGAAGTTATCAGACTGCGCTTTAATGGTTTTAATGGAGTGGTCAGTCCAGACTATCTGCTTTTTAATCCAATCTCTACTCACTTTTTTGGTTTGGATCACAATTACTGCAGACATAAGCTGTGTTCCAATGCCTAGGCTGCATTTGTGGTTAGTTTTTTGTGGttagttaggtttttttttttttcagctgctACGCCACTAAGGGTTGTTTCAAAGTGAAGGACCTTTCACATGCAGCTGACGTATAGAGTGATTTGGAAGACACAAATCATGTATCCTTGAATCTATGGACTTTATTTGCCCACAATTCACAGGAAAACAAGGCGCACCACAGAAATTGAGCAGTTAAGCCTtcattttatgttaattttatgttatgttaaggTTTTTAGAAGAAAATGTTCCTTAAAAGCACCGTAGAGTGCTTATCTACAGTTTCAAACAGAAGAAGAACTAAAAGTTCCTCAAGAAACTCAAACACTGTGTGATCAAAAAGCCTGAGAAGAAGCCTTTATATGGTACTTCTTCTACCTCTACTGTAGCCTAGGCTTTGGAACGCAGCTAATATGTAAGAATTTCCAGACCAGTGGTTCCCAGCCTTGTTCTTGGAAGAACCTCCTGTTCTAACATCACCCTAGCCTTCACACTAGGGCCAGCTTCACATAGGAGCTTTAGAAGCTCTCCAGACTTTACCTGCAGCTGCCCTTTTGTTCATGTGGCATAGAACCAGAGACTCATGTGGGATGCGAGAACACAAAAGGAAATGTTCTGCGTGGTTTTGGCAAGGGGCGGAGCTTTTGGACGTTCAGTATGACCCACTGGGTAAATTCTCTAGAAAAATACCTGCTTCTTTCATACAAGCTCATTCAGACACTACCCAGAGGGCTGGTGGAATAATCTCTGACCCAACTCACATGTATGGAAGCCAATTCCCTGCAccttaaaaagattttattttaaaatagtatgtagttattttgagataccaactctatttcattattttgtgatagtaagtcattattttaaatttttttttttttcaaaaccaaacactcttgctatctcaaaataatgacttgctatctcaaaatcataagatagcagtttacttcagaagaaaaaaagtgtgctggattttttctttcttaattttAGGTGGCCGGAATGGGCTTTTATAGATCCGCATGGCTTCTCTAGGTAATATACTGAGTTACTGTACAGGTGTGAAAGGGCTTAGAATGTGCAGATCAGGATTAGGGTTGAGAGCCActgatctggaaaaaaatgcttcattataaaccttttattctattaatttCTCAATTGTATCTCTCTTGTATTTCCATCATcagttctttcatttttaaacaatcCCTGTCTGCAGTTATCTTAAATATGCACgaaatgtgatttttctgtttaattCAGCCATTAAGATGTCCATCTTGGTTAATCAGAGCGTTCTGATGTGAAACGTAGCACTGTAGAAATTCAAATTTAACTCAAACTCTTATTAAAAGGTAGGTTAAAGAAAGAGATTTAGAAGAAATCGAGAATTTTTGACTTCACACAAATTAGCCATCCAAATATTTacttatgaatgcattacatATATCATAAGTAATACAGAATTTAAATACTGCATCACTATATCTGTGTGATATATAATCATTGGGGCAGCTGTATCCATTCATCATTGCTGTAACATAAATCTAGAATCAGTCATTATCTCTGTAATTAACCATTTCATACCAGATCACTCTGAATGACACTTTTCAGCATAATGGCTTAATTATACAGACTTCATTGAAGGAAAATAAGTGGAATTCTCATTTACCATATGTTAAATCATAAAGATCAGTGTCTTTTGGCAGCTGGCAGAATCTAATCTTGTTAACTACTTACTCTTAACAGCACCCAATTCCAAAAAATCGCAGAAAACGCTGCAGTGGCGGTTGTAACAGCAGGCTAACGATATGCAAATGAGACCAACGTATCTGGTCACAGTTTGCTTCATTCACTGTTAGCCACGTTAGCACACGTCTGGGTGCAGAACTCCTTTTGTTTCCTGCGTGGACTGACTCCACCTTGTGGCAAAATGTAGTAAAAACAAAGCTGTTCTaaattcaaaaagaaaaaaaaaggtacagCAGTGGTCCATGTGTCTGTCGAGTCATCTGtaagtctgtctgtctctgtccatAGGTCTTGTCTGTCAGCTTTACGCCAGTCATTATTGAAGCTCTGAGATGCGAGGTGTTCAATGGCCCTTGCTTCCTTTCCTTTTAAAAGGGAGGGGACATGAAGGTACTGAAGGATTAAGTggcttttatttttctccaaaaaaaaaagaaaaggaaaaaagcagCATAGTGCGTTTGTGATTGCTGACCAGGCTCATATCATCCTGTTGCGTTTATGGGTCGGCGAGTCTGTGATGACATCAGTGCACTGGGCTGATGTCCGCTTTCTGTTCCCGCCACTGTCCAGGTGCAGCGCCATCTCCTCCGATATGAAAGTGTTCAAGTCCACGTCGTGAAAGCCGCTTCTCCTGCGGCTGGAGTTGGAGCTGCTACTGACGTGAGTGGGGGAGCCAGGAGTGCTGGAACGCACGCTAATGCTCGCCATCGCTCCACTTAGAC

Function

NR:

description
UPF0472 protein C16orf72 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19354 True 3942 lncRNA 0.39 2 29007032 29011028

Neighbor

gene id symbol gene type direction distance location
usp7 usp7 coding downstream 11927 28966485 ~ 28995105 (-)
ptx4 NA coding downstream 63942 28934626 ~ 28943090 (-)
clcn7 clcn7,LOC107738625,LOC107590582,LOC107685922,LOC107733862,LOC107690253,LOC107568008 coding downstream 73264 28905061 ~ 28933768 (-)
eci1 NA coding downstream 177518 28821968 ~ 28829514 (-)
naa60 naa60,nat15,LOC107690248,LOC107568044,LOC107685925 coding downstream 194908 28802090 ~ 28812124 (-)
grin2a grin2a,LOC107690256,LOC107685916,LOC107568390 coding upstream 300382 29311410 ~ 29583262 (-)
socs1 socs1 coding upstream 867013 29878041 ~ 29880914 (-)
tmc5 tmc5 coding upstream 931395 29942423 ~ 29960792 (-)
LOC103032739 NA coding upstream 1871076 30882104 ~ 30884340 (-)
LOC103033392 NA coding upstream 1926258 30937286 ~ 30945392 (-)
G14420 NA non-coding downstream 43205 28960341 ~ 28963827 (-)
G14417 NA non-coding downstream 55804 28950745 ~ 28951228 (-)
G14412 NA non-coding downstream 82782 28903761 ~ 28924250 (-)
G14415 NA non-coding downstream 106932 28899353 ~ 28900100 (-)
LOC111193842 NA non-coding downstream 191154 28813041 ~ 28815878 (-)
G14430 NA non-coding upstream 53296 29064324 ~ 29064730 (-)
G14433 NA non-coding upstream 89888 29100916 ~ 29101222 (-)
G14445 NA non-coding upstream 117977 29129005 ~ 29129372 (-)
G14450 NA non-coding upstream 144253 29155281 ~ 29155918 (-)
G14452 NA non-coding upstream 166533 29177561 ~ 29177896 (-)
carhsp1 carhsp1,LOC107733846,LOC107576530,LOC107738622,LOC107590589,LOC107690249 other downstream 210574 28749534 ~ 28796458 (-)
fam214b fam214b,LOC102776582,LOC107684984,LOC107595918,LOC107672624 other downstream 1968286 27023495 ~ 27038746 (-)
G14113 NA other downstream 2104319 26899005 ~ 26902713 (-)
fam109a LOC108415891 other downstream 2173419 26824856 ~ 26833613 (-)
G13960 dscaml1 other downstream 2308239 26670119 ~ 26698793 (-)
emp2 emp2 other upstream 602458 29613486 ~ 29643303 (-)
dexi dexi,LOC107590611 other upstream 746659 29757687 ~ 29761252 (-)
LOC111193878 NA other upstream 877771 29888799 ~ 29892305 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other upstream 1249990 30261018 ~ 30268350 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other upstream 1663032 30674060 ~ 30725921 (-)

Expression


Co-expression Network