G14445


Basic Information

Item Value
gene id G14445
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 29129005 ~ 29129372 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19374
agacaaaccaagtctccctgaagctgcgggagtctcccgcatttcggtagtggctccctgatgctcgcgagtcacatataatctcccagaattcagaacgagcgccccaaacgcgcacacaggccacagactttttttctctaatcgcgtgtgggaaggagagagagaaaacagagagggttctgattggcctgttctctgcaaagagtctgtgagacagccaatcagtttttagtgtgggcgggcagtgttttccccccctcccggacgggatttgttcagtgagtgagagaaagcagatcatggcgaaggcaatattaataattattgtaatatgatatgaaatgtttttgatgttgtgcaatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19374 True 368 lncRNA 0.48 1 29129005 29129372

Neighbor

gene id symbol gene type direction distance location
usp7 usp7 coding downstream 133900 28966485 ~ 28995105 (-)
ptx4 NA coding downstream 185915 28934626 ~ 28943090 (-)
clcn7 clcn7,LOC107738625,LOC107590582,LOC107685922,LOC107733862,LOC107690253,LOC107568008 coding downstream 195237 28905061 ~ 28933768 (-)
eci1 NA coding downstream 299491 28821968 ~ 28829514 (-)
naa60 naa60,nat15,LOC107690248,LOC107568044,LOC107685925 coding downstream 316881 28802090 ~ 28812124 (-)
grin2a grin2a,LOC107690256,LOC107685916,LOC107568390 coding upstream 182038 29311410 ~ 29583262 (-)
socs1 socs1 coding upstream 748669 29878041 ~ 29880914 (-)
tmc5 tmc5 coding upstream 813051 29942423 ~ 29960792 (-)
LOC103032739 NA coding upstream 1752732 30882104 ~ 30884340 (-)
LOC103033392 NA coding upstream 1807914 30937286 ~ 30945392 (-)
G14433 NA non-coding downstream 27783 29100916 ~ 29101222 (-)
G14430 NA non-coding downstream 64275 29064324 ~ 29064730 (-)
G14425 cunh16orf72,LOC103025273,LOC105900007,LOC107685917 non-coding downstream 117977 29007032 ~ 29011028 (-)
G14420 NA non-coding downstream 165178 28960341 ~ 28963827 (-)
G14417 NA non-coding downstream 177777 28950745 ~ 28951228 (-)
G14450 NA non-coding upstream 25909 29155281 ~ 29155918 (-)
G14452 NA non-coding upstream 48189 29177561 ~ 29177896 (-)
G14453 NA non-coding upstream 69177 29198549 ~ 29198750 (-)
G14455 NA non-coding upstream 98918 29228290 ~ 29228495 (-)
G14456 NA non-coding upstream 105027 29234399 ~ 29234623 (-)
carhsp1 carhsp1,LOC107733846,LOC107576530,LOC107738622,LOC107590589,LOC107690249 other downstream 332547 28749534 ~ 28796458 (-)
fam214b fam214b,LOC102776582,LOC107684984,LOC107595918,LOC107672624 other downstream 2090259 27023495 ~ 27038746 (-)
G14113 NA other downstream 2226292 26899005 ~ 26902713 (-)
fam109a LOC108415891 other downstream 2295392 26824856 ~ 26833613 (-)
G13960 dscaml1 other downstream 2430212 26670119 ~ 26698793 (-)
emp2 emp2 other upstream 484114 29613486 ~ 29643303 (-)
dexi dexi,LOC107590611 other upstream 628315 29757687 ~ 29761252 (-)
LOC111193878 NA other upstream 759427 29888799 ~ 29892305 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other upstream 1131646 30261018 ~ 30268350 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other upstream 1544688 30674060 ~ 30725921 (-)

Expression


Co-expression Network