LOC103043612 (LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578)


Basic Information

Item Value
gene id LOC103043612
gene name LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 30674060 ~ 30725921 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19766
AGATGTGTTGGATGGAAGTACGGGTATGTTCGACTCTTCGTTTATCAGTTTTTATAGGAGTGAATAAGTTCTGATCCACATCACTGCCTTTAACGCACATAAATCTGctcataattcatttttataacGATTTGAATATGAATAACTGACCCCGGATCAGCAGTCGCTCTCTGAGAAGATTAATAAAGTGGTTTTGGGAAATCTCAATAAGAAAAATTTAAAACTGTAACTCAAACTCTTATACAACTAAACCAATAAACTTTACACTTTTACAAAGTA
>XM_022676127.1
cacacacgaaGAAAGAGGATAtgactttcactttcactttacacacactgtaGCTGACTCACCGGGCGTGGAAGACGATActgatacacacaaacacagagagaccaCCTAAAGGACGAATACaaacccaccacacacacacacacacacacacacacacacacacacacacacataaacacacacacagagaaatggCCTTCAAATACCCTGAAGTACGGCGAGATGAGAATAAGGTGGATGACTATAATGGGGTGAAGATTCCCGACCCTTACTGGTGGCTGGAGGATCCGGACAGCGAGGAGACAAAGGCGTTTGTCGAGGAGCAGAATAAGCTGACCATGCCGTTCTTGGAGAACTGTGAGGTCAGGGCTCAGTTCCAGCAGCGGCTCACCGAGCTCTACAACTACCCCAAATACAGCTGCCCATACAAGAGAGGAAGCAGGTATTTTTACTTTCATAACGAGGGTCTGCAGAACCAGGATGTCCTGTATGTTCAGGACTCTCTGGACAGCCCTGCTTCGGTCTTCTTTGATCCAAACAAGCTTTCAGAGGATGGAACCGTGGCTCTCAAGAtGGGGCGTCTGTCGGAGGAGTGCGAGTATTTTGCGTATGGTCTGAGCAGCGCTGGCTCTGATTGGGTGACGGTTAAATTTATGAAGGCTGATGATCTCACTCAGCTACCGGATGTTCTGGAGAGGGTGAAGTTCAGCTGTCTAGCCTGGACTCATGATGCCAAGGGTATATTCTACAACTGCTACCCACTACAGGATGGAAAGGCTGATGGTACCGAGACCACAACCAACCTCAATCAGAAACTCTACTACCATGTGATCGGGACCAGCCAATCGCAGGACATCCTGGTGGCAGAATTTCCTGACCATCCAAAATGGCACAGCAGTGTCACTgtgtCTGATGATGGGCGGTATGCAGTGTTGTGTATTACTGAAGGTTGTGAGCCGGTCAATCAGCTGTGGTACTGTGACCTACAGCAACTACCCAAAGGCATTtcagGCTTGTTGCCGTGGGTGAAGCTGGTGGAGACGTTTGAGGCGCAGTACTCCTACGTGACCAATGAGGGCAGCGTTTTCACCTTCCGTACGAACCTGGACGCTCCGCGCTACCGAGTCATTAACATCGACCTGCAGCAGCCGGAGCGCGAGCGATGGAGCACCCTCATCCCTCAGCACGACAAAGACGTTCTGGGCTTCGTGCAGTGTGTGAACCAGCGCCACCTCCTGGTGAACTACGTGCATGACGTGAAGGACATCCTGCAGGTGTACGAGCTCTCCACTGGGAAGTGGATCCGTGATCTGCCCCTGGACGTGGGCACAGTGGCGGGACTGAGCTGCAAGAAGAAACACGCCGACTTCTTCTACAAGTTCACTTCCTTTACCACACCCGGAATAATCTATCACTATGATCTGAGTCAGCCCAACGCAGAGCCCACAGTGTTCAGACAGGTGGAGGTGAAGGGTGTACAGTCCTCAGACTACCAGACCAGCCAGGTGTTCTATTCCAGTAAGGATGGCACTAAAATACCCATGTTTCTGGTACACGCCCGCGGCATTCAGAAGGACGGCTCCCATCCAGTTTTCCTGTACGGATACGGCGGCTTCGAGAACTCCATCCAGCCGTACTACAAtacagCGAACCTGCTCTTCGTCAGGCACCTGGGGGGCATCCTGGCTGTGGCCAACATCAGAGGAGGAGGGGAGTACGGGCAGACCTGGCACAAAGcgGGAACCCTGGGAAAAAAGCAGAACTGCTTTGATGATTTCCAGTGTGCTGCAGAGTACCTGATAAAGGAGAATTACACCACCTCCACCCGCATCGCCATCAACGGAGCCTCCAACGGGGGGTTACTCGTGGCCGCCTGTGTGAACCAGCGTCCGGATCTGTTCGGCTGTGCCGTGGCTGAGGTGGGGGTGATGGACATGCTGAAGTTCCACAAGTTCACCATCGGCCACGCCTGGACCACCGACTACGGCTGTGCTGACGACCCCGAGCAGTTTAAGTGGCTCATTAAGTACTCTCCTCTCCATAACCTCCCCAAACCCGACAGCGAGGGACCCCCGTACCCGGCCATGCTGCTGCTGACGGCGGATCACGACGACCGCGTGGTTCCCCTGCACACTCTGAAGTACACGGCCACCCTGCAGCACGGCGTGGGCCGCCGGCCCGACCAGAATCAGCCCCTGCTGGTCCGGGTGGACACCCGCAGCGGCCACGGCGCCGGCAAACCCACCGCCAAGGCCATCCTGGAGGACACCCACATCTTCTCCTTCATCGCCCAGACCCTCGGCCTCCGCTGGAGGGAGTGAGGGGTCAGcggagggggggtgggggtcgGGAGATCTGAGAGGGTTTAGATGGTTTTGATAGGAATAATCTGGAATATTCTGGAATTAGAGATGATTAGAGATGGAAGTACGGGTATGTTCGACTCTTCGTTTATCAGTTTTTATAGGAGTGAATAAGTTCTGATCCACATCACTGCCTTTAACGCACATAAATCTGctcataattcatttttataacGATTTGAATATGAATAACTGACCCCGGATCAGCAGTCGCTCTCTGAGAAGATTAATAAAGTGGTTTTGGGAAATCTCAATAAGAAAAATTTAAAACTGTAACTCAAACTCTTATACAACTAAACCAATAAACTTTACACTTTTACAAAGTAA
>XM_022676131.1
cacacacgaaGAAAGAGGATAtgactttcactttcactttacacacactgtaGCTGACTCACCGGGCGTGGAAGACGATActgatacacacaaacacagagagaccaCCTAAAGGACGAATACaaacccaccacacacacacacacacacacacacagagaaatggCCTTCAAATACCCTGAAGTACGGCGAGATGAGAATAAGGTGGATGACTATAATGGGGTGAAGATTCCCGACCCTTACTGGTGGCTGGAGGATCCGGACAGCGAGGAGACAAAGGCGTTTGTCGAGGAGCAGAATAAGCTGACCATGCCGTTCTTGGAGAACTGTGAGGTCAGGGCTCAGTTCCAGCAGCGGCTCACCGAGCTCTACAACTACCCCAAATACAGCTGCCCATACAAGAGAGGAAGCAGGTATTTTTACTTTCATAACGAGGGTCTGCAGAACCAGGATGTCCTGTATGTTCAGGACTCTCTGGACAGCCCTGCTTCGGTCTTCTTTGATCCAAACAAGCTTTCAGAGGATGGAACCGTGGCTCTCAAGAtGGGGCGTCTGTCGGAGGAGTGCGAGTATTTTGCGTATGGTCTGAGCAGCGCTGGCTCTGATTGGGTGACGGTTAAATTTATGAAGGCTGATGATCTCACTCAGCTACCGGATGTTCTGGAGAGGGTGAAGTTCAGCTGTCTAGCCTGGACTCATGATGCCAAGGGTATATTCTACAACTGCTACCCACTACAGGATGGAAAGGCTGATGGTACCGAGACCACAACCAACCTCAATCAGAAACTCTACTACCATGTGATCGGGACCAGCCAATCGCAGGACATCCTGGTGGCAGAATTTCCTGACCATCCAAAATGGCACAGCAGTGTCACTgtgtCTGATGATGGGCGGTATGCAGTGTTGTGTATTACTGAAGGTTGTGAGCCGGTCAATCAGCTGTGGTACTGTGACCTACAGCAACTACCCAAAGGCATTtcagGCTTGTTGCCGTGGGTGAAGCTGGTGGAGACGTTTGAGGCGCAGTACTCCTACGTGACCAATGAGGGCAGCGTTTTCACCTTCCGTACGAACCTGGACGCTCCGCGCTACCGAGTCATTAACATCGACCTGCAGCAGCCGGAGCGCGAGCGATGGAGCACCCTCATCCCTCAGCACGACAAAGACGTTCTGGGCTTCGTGCAGTGTGTGAACCAGCGCCACCTCCTGGTGAACTACGTGCATGACGTGAAGGACATCCTGCAGGTGTACGAGCTCTCCACTGGGAAGTGGATCCGTGATCTGCCCCTGGACGTGGGCACAGTGGCGGGACTGAGCTGCAAGAAGAAACACGCCGACTTCTTCTACAAGTTCACTTCCTTTACCACACCCGGAATAATCTATCACTATGATCTGAGTCAGCCCAACGCAGAGCCCACAGTGTTCAGACAGGTGGAGGTGAAGGGTGTACAGTCCTCAGACTACCAGACCAGCCAGGTGTTCTATTCCAGTAAGGATGGCACTAAAATACCCATGTTTCTGGTACACGCCCGCGGCATTCAGAAGGACGGCTCCCATCCAGTTTTCCTGTACGGATACGGCGGCTTCGAGAACTCCATCCAGCCGTACTACAAtacagCGAACCTGCTCTTCGTCAGGCACCTGGGGGGCATCCTGGCTGTGGCCAACATCAGAGGAGGAGGGGAGTACGGGCAGACCTGGCACAAAGcgGGAACCCTGGGAAAAAAGCAGAACTGCTTTGATGATTTCCAGTGTGCTGCAGAGTACCTGATAAAGGAGAATTACACCACCTCCACCCGCATCGCCATCAACGGAGCCTCCAACGGGGGGTTACTCGTGGCCGCCTGTGTGAACCAGCGTCCGGATCTGTTCGGCTGTGCCGTGGCTGAGGTGGGGGTGATGGACATGCTGAAGTTCCACAAGTTCACCATCGGCCACGCCTGGACCACCGACTACGGCTGTGCTGACGACCCCGAGCAGTTTAAGTGGCTCATTAAGTACTCTCCTCTCCATAACCTCCCCAAACCCGACAGCGAGGGACCCCCGTACCCGGCCATGCTGCTGCTGACGGCGGATCACGACGACCGCGTGGTTCCCCTGCACACTCTGAAGTACACGGCCACCCTGCAGCACGGCGTGGGCCGCCGGCCCGACCAGAATCAGCCCCTGCTGGTCCGGGTGGACACCCGCAGCGGCCACGGCGCCGGCAAACCCACCGCCAAGGCCATCCTGGAGGACACCCACATCTTCTCCTTCATCGCCCAGACCCTCGGCCTCCGCTGGAGGGAGTGAGGGGTCAGcggagggggggtgggggtcgGGAGATCTGAGAGGGTTTAGATGGTTTTGATAGGAATAATCTGGAATATTCTGGAATTAGAGATGATTAGAGATGGAAGTACGGGTATGTTCGACTCTTCGTTTATCAGTTTTTATAGGAGTGAATAAGTTCTGATCCACATCACTGCCTTTAACGCACATAAATCTGctcataattcatttttataacGATTTGAATATGAATAACTGACCCCGGATCAGCAGTCGCTCTCTGAGAAGATTAATAAAGTGGTTTTGGGAAATCTCAATAAGAAAAATTTAAAACTGTAACTCAAACTCTTATACAACTAAACCAATAAACTTTACACTTTTACAAAGTAA

Function

NR:

description
PREDICTED: prolyl endopeptidase-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0070008 serine-type exopeptidase activity molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01322 PREP; prolyl oligopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
TU19766 False 279 lncRNA 0.46 2 30674061 30725921
XM_022676127.1 True 2693 mRNA 0.53 15 30674060 30704600
XM_022676131.1 False 2661 mRNA 0.53 16 30674060 30704600

Neighbor

gene id symbol gene type direction distance location
tmc5 tmc5 coding downstream 713268 29942423 ~ 29960792 (-)
socs1 socs1 coding downstream 793146 29878041 ~ 29880914 (-)
grin2a grin2a,LOC107690256,LOC107685916,LOC107568390 coding downstream 1090798 29311410 ~ 29583262 (-)
usp7 usp7 coding downstream 1678955 28966485 ~ 28995105 (-)
ptx4 NA coding downstream 1730970 28934626 ~ 28943090 (-)
LOC103032739 NA coding upstream 156183 30882104 ~ 30884340 (-)
LOC103033392 NA coding upstream 211365 30937286 ~ 30945392 (-)
LOC111193890 NA coding upstream 220844 30946765 ~ 30954116 (-)
LOC103046043 NA coding upstream 230272 30956193 ~ 30962532 (-)
LOC111193897 LOC108413061 coding upstream 238627 30964548 ~ 30966942 (-)
G14720 NA non-coding downstream 1591 30672052 ~ 30672469 (-)
G14718 NA non-coding downstream 7611 30661819 ~ 30666449 (-)
G14694 NA non-coding downstream 249773 30424072 ~ 30424287 (-)
G14672 NA non-coding downstream 415183 30258418 ~ 30258877 (-)
G14660 NA non-coding downstream 444659 30145454 ~ 30229401 (-)
G14748 prdm1,LOC106941180,LOC103155240 non-coding upstream 40441 30766362 ~ 30767820 (-)
G14778 NA non-coding upstream 178563 30904484 ~ 30904698 (-)
G14807 rpl14,LOC107710319,LOC107688416,LOC107654689 non-coding upstream 198919 30924840 ~ 30928389 (-)
G14820 NA non-coding upstream 257619 30983540 ~ 30984031 (-)
G14834 NA non-coding upstream 322435 31048356 ~ 31048607 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other downstream 405710 30261018 ~ 30268350 (-)
LOC111193878 NA other downstream 781755 29888799 ~ 29892305 (-)
dexi dexi,LOC107590611 other downstream 912808 29757687 ~ 29761252 (-)
emp2 emp2 other downstream 1030757 29613486 ~ 29643303 (-)
carhsp1 carhsp1,LOC107733846,LOC107576530,LOC107738622,LOC107590589,LOC107690249 other downstream 1877602 28749534 ~ 28796458 (-)
LOC103045124 NA other upstream 163685 30889606 ~ 30892648 (-)
G14781 LOC107602351 other upstream 188989 30914910 ~ 30923249 (-)
trnap-agg_1 NA other upstream 197891 30923812 ~ 30924087 (-)
G14839 NA other upstream 327843 31053764 ~ 31055503 (-)
nfkb1 nfkb1,LOC106536450 other upstream 1396301 32122222 ~ 32159963 (-)

Expression


Co-expression Network