G14820


Basic Information

Item Value
gene id G14820
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 30983540 ~ 30984031 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19905
CAAACTCTTCACTGGTTCTGTGCATACATATATTTCTACATAGATAAATCTGCAGAATGTCACCTCGCAGCACGTTCAGCGCTCCCTCGATGCTCCCGCTGTTGAGGAAGAGTTCTGTGGCTGTGGTGATGAGCTTACAACGAGACATCCACTCCTCACTGCTGAAAAGCCCTTTAAGGGTGGAGAACTCCACGTGCAGTCGGGACATTGCAAGCACCACCTTCATTCCCTTGGCCCAGTCGAGGATtctgtaatatttaaacattagtGAGACTCCCACCCGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19905 True 286 lncRNA 0.35 2 30983540 30984031

Neighbor

gene id symbol gene type direction distance location
LOC103046348 NA coding downstream 13382 30967269 ~ 30970158 (-)
LOC111193897 LOC108413061 coding downstream 16598 30964548 ~ 30966942 (-)
LOC103046043 NA coding downstream 21008 30956193 ~ 30962532 (-)
LOC111193890 NA coding downstream 29424 30946765 ~ 30954116 (-)
LOC103033392 NA coding downstream 38148 30937286 ~ 30945392 (-)
LOC103047264 LOC108275079,LOC107710336,LOC107688362,LOC107706145,LOC107591988,LOC107654751 coding upstream 74737 31058768 ~ 31083292 (-)
LOC103034575 LOC103034575,LOC108414240,LOC108256545,LOC107706261,LOC107710337,LOC107654753,LOC107688361,LOC107592060 coding upstream 122277 31106308 ~ 31125146 (-)
LOC107197536 LOC107086207 coding upstream 232201 31216232 ~ 31222423 (-)
pdlim7 pdlim7 coding upstream 896763 31880794 ~ 31943297 (-)
higd2a higd2a coding upstream 971575 31955606 ~ 31958456 (-)
G14807 rpl14,LOC107710319,LOC107688416,LOC107654689 non-coding downstream 55151 30924840 ~ 30928389 (-)
G14778 NA non-coding downstream 78842 30904484 ~ 30904698 (-)
G14748 prdm1,LOC106941180,LOC103155240 non-coding downstream 215720 30766362 ~ 30767820 (-)
G14720 NA non-coding downstream 311071 30672052 ~ 30672469 (-)
G14718 NA non-coding downstream 317091 30661819 ~ 30666449 (-)
G14834 NA non-coding upstream 64325 31048356 ~ 31048607 (-)
G14876 ddx41,LOC107749764,LOC107750345 non-coding upstream 196955 31180986 ~ 31193793 (-)
G14877 NA non-coding upstream 197795 31181826 ~ 31229953 (-)
G14879 NA non-coding upstream 228538 31212569 ~ 31214056 (-)
G14882 NA non-coding upstream 271954 31255985 ~ 31256204 (-)
trnap-agg_1 NA other downstream 59453 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 60291 30914910 ~ 30923249 (-)
LOC103045124 NA other downstream 90892 30889606 ~ 30892648 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other downstream 257619 30674060 ~ 30725921 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other downstream 715190 30261018 ~ 30268350 (-)
G14839 NA other upstream 69733 31053764 ~ 31055503 (-)
nfkb1 nfkb1,LOC106536450 other upstream 1138191 32122222 ~ 32159963 (-)
hopx hopx,LOC107552340 other upstream 1830017 32814048 ~ 32820804 (-)
G15497 NA other upstream 3150561 34134592 ~ 34136732 (-)
evc2 NA other upstream 3167792 34151823 ~ 34172017 (-)

Expression


Co-expression Network