G14839


Basic Information

Item Value
gene id G14839
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 31053764 ~ 31055503 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19927
ATGgacggatggacggatggacagatgaatggatgggCATTAGAGTGATGGGAAATGAAAGAGTGCCTGAATTAGGACGGCTGAGCtttgagttgtttttgatttattattattattattattattattattattattattattattattattattatggtaacactttctatgaatgtcagtTCTACAAGACTCTATAGACATACCCATTACCCATTATAAtacattcataaagcattataaccatgattatacatatttataaaaatgcatcatagtccataatgcattaataactgtgtttataacatcTTATACATAAATACCAAGAACCACAGTCCAAGCTTGTAGACTTGGACTAAGCATtatgacaaaaataattatgtaaatatatttaaagcacTCATAATCTATATTTGTCTTCAATATCATTTTTGTTATAAtcacttataatgtattataacaggtctttttgggctccaagtaaagtgacaggCTTTCATTTAATTGTgagactagattattaatgatagatatgTACCATTTTACTATGTTAACATACTTATAGATATAAGTACAGCTTATAATggattatgatcacaagtcataatgcataataaacctGGATATAATGAGTTACTGTATGCATTGTTTTAAATActtataaccatgtttttaatgccttatgaatgtgtttatagagtctaatagagattaCATTAATAGGAAgtgttactattattattattattattattattattattattattattattattattattattattataattacatgaGTTGAATAGATGGTGAAGATGCTGCAGAAGGACCTGAGCACATGTTTAGTCTGTGCACTGTACTTGTttgtctctttgtttgtttgtttgtttgtttatttatttgttttatcacAGATAAATACTTTGCACTTTCACTCTTACAATTTAATTGTTCTATTTTGGtgttaatgtgttataaatgttcATATGGAGTTTGAATCATGCTGTTGTTATGCCTCAAAAGGAATTATTGAATGATTGCCTAATACCCCCTAATATTgtttatagtatagtgtagacCCCCTTGTGCCTTCATAACAACTAAAGTTTTGGAAGTTGTAAAGTGGGTGGGGCTTAATATGTAAATACCACTAAATCCAAAATGGAACAAAATACCACTAttgcataatataaaaaaaagtctaaatgtactgtattttggtgtgttttagaATTTAttgaacacattattaaaaaatatttttttttataattcgtTTTTTGGGTTTCCAAATTATAAAACATCGGTTAAACAGCATAGATATTAGCAACACATATGATACAAAAACCCTATAAGAGTGAAAGAAGAAGAcaaaagaggaggaaaaaagcAGCACTGAACATTTAACATCAAAGTTAGCTGTCAATGTTCAGTATAAATGATTATAGTTGTGAAAACTTTAGTGCATCCCCAGTTCCCACCCCCTGATAGGTACCATTGGAAACACTCAAATATCCACTGGCTTGATTCTAACTCCATAGAAAGTATCCTGAAGAAATTTGtctgaatctgatttttttttttaaactggtttTGGTCTCAGGTAGATGGTGAACAGGGTGGTACCTAATCTGAGTGGTCTGTATGCAATAAAATTCACTGTAAATTTGCaataaaacaaccaaaaacCAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19927 True 1703 TUCP 0.29 2 31053764 31055503

Neighbor

gene id symbol gene type direction distance location
LOC103046348 NA coding downstream 83606 30967269 ~ 30970158 (-)
LOC111193897 LOC108413061 coding downstream 86822 30964548 ~ 30966942 (-)
LOC103046043 NA coding downstream 91232 30956193 ~ 30962532 (-)
LOC111193890 NA coding downstream 99648 30946765 ~ 30954116 (-)
LOC103033392 NA coding downstream 108372 30937286 ~ 30945392 (-)
LOC103047264 LOC108275079,LOC107710336,LOC107688362,LOC107706145,LOC107591988,LOC107654751 coding upstream 3265 31058768 ~ 31083292 (-)
LOC103034575 LOC103034575,LOC108414240,LOC108256545,LOC107706261,LOC107710337,LOC107654753,LOC107688361,LOC107592060 coding upstream 50805 31106308 ~ 31125146 (-)
LOC107197536 LOC107086207 coding upstream 160729 31216232 ~ 31222423 (-)
pdlim7 pdlim7 coding upstream 825291 31880794 ~ 31943297 (-)
higd2a higd2a coding upstream 900103 31955606 ~ 31958456 (-)
G14834 NA non-coding downstream 5157 31048356 ~ 31048607 (-)
G14820 NA non-coding downstream 69733 30983540 ~ 30984031 (-)
G14807 rpl14,LOC107710319,LOC107688416,LOC107654689 non-coding downstream 125375 30924840 ~ 30928389 (-)
G14778 NA non-coding downstream 149066 30904484 ~ 30904698 (-)
G14748 prdm1,LOC106941180,LOC103155240 non-coding downstream 285944 30766362 ~ 30767820 (-)
G14876 ddx41,LOC107749764,LOC107750345 non-coding upstream 125483 31180986 ~ 31193793 (-)
G14877 NA non-coding upstream 126323 31181826 ~ 31229953 (-)
G14879 NA non-coding upstream 157066 31212569 ~ 31214056 (-)
G14882 NA non-coding upstream 200482 31255985 ~ 31256204 (-)
G14883 NA non-coding upstream 205265 31260768 ~ 31260986 (-)
trnap-agg_1 NA other downstream 129677 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 130515 30914910 ~ 30923249 (-)
LOC103045124 NA other downstream 161116 30889606 ~ 30892648 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other downstream 327843 30674060 ~ 30725921 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other downstream 785414 30261018 ~ 30268350 (-)
nfkb1 nfkb1,LOC106536450 other upstream 1066719 32122222 ~ 32159963 (-)
hopx hopx,LOC107552340 other upstream 1758545 32814048 ~ 32820804 (-)
G15497 NA other upstream 3079089 34134592 ~ 34136732 (-)
evc2 NA other upstream 3096320 34151823 ~ 34172017 (-)
G15498 NA other upstream 3185823 34241326 ~ 34242318 (-)

Expression


Co-expression Network