G14882


Basic Information

Item Value
gene id G14882
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 31255985 ~ 31256204 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19985
ttaatccactgaaaaatgttcaatttgctctgaccgacgagacatattcaccccggatttttggtgtttttatcccggatttttgtgttttcaccccatattttttctgtgtttttagcccagatttctttgtgttttcatcccggaatttctgctgccccacaccgaggctgctgctgcacggtttctccgctgcgcaagccagcccagtaaattgctg

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase RNF169

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19985 True 220 lncRNA 0.40 1 31255985 31256204

Neighbor

gene id symbol gene type direction distance location
LOC107197536 LOC107086207 coding downstream 33562 31216232 ~ 31222423 (-)
LOC103034575 LOC103034575,LOC108414240,LOC108256545,LOC107706261,LOC107710337,LOC107654753,LOC107688361,LOC107592060 coding downstream 130839 31106308 ~ 31125146 (-)
LOC103047264 LOC108275079,LOC107710336,LOC107688362,LOC107706145,LOC107591988,LOC107654751 coding downstream 172693 31058768 ~ 31083292 (-)
LOC103046348 NA coding downstream 285827 30967269 ~ 30970158 (-)
LOC111193897 LOC108413061 coding downstream 289043 30964548 ~ 30966942 (-)
pdlim7 pdlim7 coding upstream 624590 31880794 ~ 31943297 (-)
higd2a higd2a coding upstream 699402 31955606 ~ 31958456 (-)
rnf44 rnf44,LOC107749756,LOC107677379 coding upstream 717388 31973592 ~ 31995512 (-)
abhd18 abhd18,LOC107595739,LOC107653339,LOC107677374,LOC107750342,LOC107587096 coding upstream 789905 32046109 ~ 32055172 (-)
dgkq dgkq,LOC107595737,LOC107749781 coding upstream 817962 32074166 ~ 32119158 (-)
G14877 NA non-coding downstream 26032 31181826 ~ 31229953 (-)
G14879 NA non-coding downstream 41929 31212569 ~ 31214056 (-)
G14876 ddx41,LOC107749764,LOC107750345 non-coding downstream 62192 31180986 ~ 31193793 (-)
G14834 NA non-coding downstream 207378 31048356 ~ 31048607 (-)
G14820 NA non-coding downstream 271954 30983540 ~ 30984031 (-)
G14883 NA non-coding upstream 4564 31260768 ~ 31260986 (-)
G14885 NA non-coding upstream 11456 31267660 ~ 31268093 (-)
G15023 NA non-coding upstream 273133 31529337 ~ 31621297 (-)
G15037 NA non-coding upstream 588978 31845182 ~ 31876961 (-)
G15022 NA non-coding upstream 621601 31877805 ~ 31879843 (-)
G14839 NA other downstream 200482 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 331898 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 332736 30914910 ~ 30923249 (-)
LOC103045124 NA other downstream 363337 30889606 ~ 30892648 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other downstream 530064 30674060 ~ 30725921 (-)
nfkb1 nfkb1,LOC106536450 other upstream 866018 32122222 ~ 32159963 (-)
hopx hopx,LOC107552340 other upstream 1557844 32814048 ~ 32820804 (-)
G15497 NA other upstream 2878388 34134592 ~ 34136732 (-)
evc2 NA other upstream 2895619 34151823 ~ 34172017 (-)
G15498 NA other upstream 2985122 34241326 ~ 34242318 (-)

Expression


Co-expression Network