G15023


Basic Information

Item Value
gene id G15023
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 31529337 ~ 31621297 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU20188
ACTCTACAGCTGTCGGACAATGaagctgaaacacctgtcatcattttagtgtgggattttaggtttcatggctaaattggagcagcctggtgttcaatcttcattaattgcacattattgcaccagtaagagcatgagtaagagtgtgaaggttcaattagcagggtaagaacacagttctgctctaaatattgcaatgcacac

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU20188 True 204 lncRNA 0.41 3 31529337 31621297

Neighbor

gene id symbol gene type direction distance location
LOC107197536 LOC107086207 coding downstream 306914 31216232 ~ 31222423 (-)
LOC103034575 LOC103034575,LOC108414240,LOC108256545,LOC107706261,LOC107710337,LOC107654753,LOC107688361,LOC107592060 coding downstream 404191 31106308 ~ 31125146 (-)
LOC103047264 LOC108275079,LOC107710336,LOC107688362,LOC107706145,LOC107591988,LOC107654751 coding downstream 446045 31058768 ~ 31083292 (-)
LOC103046348 NA coding downstream 559179 30967269 ~ 30970158 (-)
LOC111193897 LOC108413061 coding downstream 562395 30964548 ~ 30966942 (-)
pdlim7 pdlim7 coding upstream 259497 31880794 ~ 31943297 (-)
higd2a higd2a coding upstream 334309 31955606 ~ 31958456 (-)
rnf44 rnf44,LOC107749756,LOC107677379 coding upstream 352295 31973592 ~ 31995512 (-)
abhd18 abhd18,LOC107595739,LOC107653339,LOC107677374,LOC107750342,LOC107587096 coding upstream 424812 32046109 ~ 32055172 (-)
dgkq dgkq,LOC107595737,LOC107749781 coding upstream 452869 32074166 ~ 32119158 (-)
G14885 NA non-coding downstream 261244 31267660 ~ 31268093 (-)
G14883 NA non-coding downstream 268351 31260768 ~ 31260986 (-)
G14882 NA non-coding downstream 273133 31255985 ~ 31256204 (-)
G14877 NA non-coding downstream 299384 31181826 ~ 31229953 (-)
G14879 NA non-coding downstream 315281 31212569 ~ 31214056 (-)
G15037 NA non-coding upstream 223885 31845182 ~ 31876961 (-)
G15022 NA non-coding upstream 256508 31877805 ~ 31879843 (-)
G15063 NA non-coding upstream 373336 31994633 ~ 31995062 (-)
G15074 NA non-coding upstream 411754 32033051 ~ 32040230 (-)
G15078 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766,LOC107669968,LOC107734024 non-coding upstream 421044 32042341 ~ 32061852 (-)
G14839 NA other downstream 473834 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 605250 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 606088 30914910 ~ 30923249 (-)
LOC103045124 NA other downstream 636689 30889606 ~ 30892648 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other downstream 803416 30674060 ~ 30725921 (-)
nfkb1 nfkb1,LOC106536450 other upstream 500925 32122222 ~ 32159963 (-)
hopx hopx,LOC107552340 other upstream 1192751 32814048 ~ 32820804 (-)
G15497 NA other upstream 2513295 34134592 ~ 34136732 (-)
evc2 NA other upstream 2530526 34151823 ~ 34172017 (-)
G15498 NA other upstream 2620029 34241326 ~ 34242318 (-)

Expression


Co-expression Network