G15063


Basic Information

Item Value
gene id G15063
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 31994633 ~ 31995062 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU20235
AACTGTTATAAACGTCTGTCCAGATGTTTTCCCATCACTattcatgataataataataataataataataataataataataacaggctGCTCTGGTGATGCTGATCATCACAGCGCAGTGCGGGAACACGGGCTCCGGTTACCGTAATGCCCCGAGTATCTCCCTGTATCCTTGTACTGAATCTGTCTCAGCATCTCAAACTCTGCATGTTTCTTGAAACTGTGGCAGAATATACTGAATTTAAGGCGCCCTTTCCACTCATAAGACATGTTGGTGtctgtataaatgtttttttcctgctgTTGATCTGTGTTAAAGCCTTTTATCCCGGGTTTTTAGAGGTAGCGGGTCCCCGGTTGTTGGCTCGGCGGCGTTACCGGCTGCTCGTTTGGCGCAAGGGTTACGTAACAGGCTAGTGCTACCGCTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20235 True 430 lncRNA 0.44 1 31994633 31995062

Neighbor

gene id symbol gene type direction distance location
higd2a higd2a coding downstream 36177 31955606 ~ 31958456 (-)
pdlim7 pdlim7 coding downstream 51336 31880794 ~ 31943297 (-)
LOC107197536 LOC107086207 coding downstream 772210 31216232 ~ 31222423 (-)
LOC103034575 LOC103034575,LOC108414240,LOC108256545,LOC107706261,LOC107710337,LOC107654753,LOC107688361,LOC107592060 coding downstream 869487 31106308 ~ 31125146 (-)
LOC103047264 LOC108275079,LOC107710336,LOC107688362,LOC107706145,LOC107591988,LOC107654751 coding downstream 911341 31058768 ~ 31083292 (-)
abhd18 abhd18,LOC107595739,LOC107653339,LOC107677374,LOC107750342,LOC107587096 coding upstream 51047 32046109 ~ 32055172 (-)
dgkq dgkq,LOC107595737,LOC107749781 coding upstream 79104 32074166 ~ 32119158 (-)
LOC103039786 ube2d2l,ube2d3,ube2d2,UBE2D2,ube2d1,LOC103039786,LOC106611705,LOC107585246,LOC105029919 coding upstream 165757 32160819 ~ 32172940 (-)
polr2b polr2b,LOC102791558 coding upstream 627119 32622181 ~ 32638918 (-)
rest NA coding upstream 654001 32649063 ~ 32658650 (-)
G15022 NA non-coding downstream 114790 31877805 ~ 31879843 (-)
G15037 NA non-coding downstream 117672 31845182 ~ 31876961 (-)
G15023 NA non-coding downstream 373336 31529337 ~ 31621297 (-)
G14885 NA non-coding downstream 726540 31267660 ~ 31268093 (-)
G14883 NA non-coding downstream 733647 31260768 ~ 31260986 (-)
G15074 NA non-coding upstream 37989 32033051 ~ 32040230 (-)
G15078 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766,LOC107669968,LOC107734024 non-coding upstream 47279 32042341 ~ 32061852 (-)
G15049 NA non-coding upstream 74100 32069162 ~ 32086925 (-)
G15050 NA non-coding upstream 126214 32121276 ~ 32133782 (-)
G15090 NA non-coding upstream 352288 32347350 ~ 32348794 (-)
G14839 NA other downstream 939130 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 1070546 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 1071384 30914910 ~ 30923249 (-)
LOC103045124 NA other downstream 1101985 30889606 ~ 30892648 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other downstream 1268712 30674060 ~ 30725921 (-)
nfkb1 nfkb1,LOC106536450 other upstream 127160 32122222 ~ 32159963 (-)
hopx hopx,LOC107552340 other upstream 818986 32814048 ~ 32820804 (-)
G15497 NA other upstream 2139530 34134592 ~ 34136732 (-)
evc2 NA other upstream 2156761 34151823 ~ 34172017 (-)
G15498 NA other upstream 2246264 34241326 ~ 34242318 (-)

Expression


Co-expression Network