G15249


Basic Information

Item Value
gene id G15249
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 32795378 ~ 32795830 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU20538
TAAGTGAGGAGGTTATATagtgtgtaaattaaatataactGTAAGAGGTGGGgttatatagtgtgtgtttgagttagTATTGAGTTAGTCGGTTGTCAGGGTGTTGGGTTACCGGTTGTAGAGGGGGGGTAACAGACCTGAGCCGGTACCGGAGCCGCCCGGGCGGTTCGGGTCCGGGTCTCGGTGTTCGGTAGTCGCGGTTTTTCCCGCGGTTTCTCGGGTTTTCTGGTTTGTAAGAAGCTCCAGAGTATAAACAGTAACCCCCCCGCCAGCGCGAGCGCAGCACCCACCGCGCTCGCCTCCCGCACACCCGCCATCCCCGCTCTGCTCCCCGCAAAGCCGCGGATTCGGATCTAAACCGGGTTAATTCGGATCTACTCCGGTTTACTCTGGTTTATTCCACGAGTCTCAGCAGCCCGCCGCCATaccgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20538 True 432 lncRNA 0.38 2 32795378 32795830

Neighbor

gene id symbol gene type direction distance location
LOC103031569 NA coding downstream 44613 32734285 ~ 32750765 (-)
rest NA coding downstream 136728 32649063 ~ 32658650 (-)
polr2b polr2b,LOC102791558 coding downstream 156460 32622181 ~ 32638918 (-)
LOC103039786 ube2d2l,ube2d3,ube2d2,UBE2D2,ube2d1,LOC103039786,LOC106611705,LOC107585246,LOC105029919 coding downstream 622438 32160819 ~ 32172940 (-)
dgkq dgkq,LOC107595737,LOC107749781 coding downstream 676220 32074166 ~ 32119158 (-)
LOC103039156 sec24b,LOC108434542,LOC107596339,LOC107731363,LOC107662171,LOC107704651 coding upstream 38666 32834496 ~ 32858295 (-)
LOC103029668 NA coding upstream 64853 32860683 ~ 32865337 (-)
LOC103029347 NA coding upstream 125195 32921025 ~ 32943593 (-)
LOC103028197 NA coding upstream 160301 32956131 ~ 32959840 (-)
LOC103027351 LOC108434533,LOC105893001 coding upstream 240019 33035849 ~ 33073381 (-)
G15244 srp72,LOC107662169,LOC107552350,LOC107731365 non-coding downstream 1036 32784189 ~ 32794342 (-)
LOC103032939 NA non-coding downstream 28813 32766097 ~ 32766565 (-)
G15233 NA non-coding downstream 78480 32716630 ~ 32716898 (-)
G15217 NA non-coding downstream 96410 32612881 ~ 32698968 (-)
G15206 NA non-coding downstream 173943 32564362 ~ 32621435 (-)
G15273 NA non-coding upstream 101597 32897427 ~ 32912129 (-)
G15272 NA non-coding upstream 110199 32906029 ~ 32908135 (-)
G15276 NA non-coding upstream 116399 32912229 ~ 32913566 (-)
G15289 NA non-coding upstream 175707 32971537 ~ 32983360 (-)
G15300 NA non-coding upstream 217540 33013370 ~ 33023936 (-)
nfkb1 nfkb1,LOC106536450 other downstream 635415 32122222 ~ 32159963 (-)
G14839 NA other downstream 1739875 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 1871291 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 1872129 30914910 ~ 30923249 (-)
LOC103045124 NA other downstream 1902730 30889606 ~ 30892648 (-)
hopx hopx,LOC107552340 other upstream 18218 32814048 ~ 32820804 (-)
G15497 NA other upstream 1338762 34134592 ~ 34136732 (-)
evc2 NA other upstream 1355993 34151823 ~ 34172017 (-)
G15498 NA other upstream 1445496 34241326 ~ 34242318 (-)

Expression


Co-expression Network