G15302



Basic Information


Item Value
gene id G15302
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 33016265 ~ 33018552 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU20618
CTCCCAAATAcagacacttacacacacacacacacacatacacacacacactcaccgcTGCAGCCCATGCTGGACAGGAGCTCCTGCAGTTCATTAGTCTCAGCAGGAGAGcgctctcccacacacactaacactcgtacactctgtgtgtttttggagaCGGCGGCAACGGCGGCGACCATATGAGCAACAGTAGCGGCGGAGAAAGATCCGGCCAATAGGACGCCTCCGTCTTCATCCAGGAGGGGGCGCAATGCCCACGGCACCATGCAACACGACTTATCCTgcaaaaacacCTGTATGATCAGTCTGTAGTCTGACAGCAGGCCGTTTTTGTACAGATCTCCTCTCACACAGGCTGGAAACACCAGCAGATCCTGACAGTGTGTGTCCAGACGAAACGTCCGGCCCTCCAGACGGCCTTCAGAGTGAACACGAGAGAAACCAGCAGAGCTCAGAACATCACACACCTCCTCcatactgcagagagagagagagagagagagattgagttaGATTGAGTTAGATTTGTGGTTTAGCTAAATTAGATCTGCACAACCACTGATTTGCTCTGGGAGGAGTAACGAGTCGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU20618 True 592 lncRNA 0.52 2 33016265 33018552

Neighbor


gene id symbol gene type direction distance location
LOC103028197 NA coding downstream 56425 32956131 ~ 32959840 (-)
LOC103029347 NA coding downstream 72672 32921025 ~ 32943593 (-)
LOC103029668 NA coding downstream 150928 32860683 ~ 32865337 (-)
LOC103039156 sec24b,LOC108434542,LOC107596339,LOC107731363,LOC107662171,LOC107704651 coding downstream 157970 32834496 ~ 32858295 (-)
LOC103031569 NA coding downstream 265500 32734285 ~ 32750765 (-)
LOC103027351 LOC108434533,LOC105893001 coding upstream 17297 33035849 ~ 33073381 (-)
kiaa0141 NA coding upstream 56581 33075133 ~ 33084176 (-)
nudt6 nudt6,LOC107690594 coding upstream 74313 33092865 ~ 33101606 (-)
ankrd50 ankrd50 coding upstream 282681 33301233 ~ 33348173 (-)
LOC103022214 NA coding upstream 880306 33898858 ~ 33909077 (-)
G15289 NA non-coding downstream 32905 32971537 ~ 32983360 (-)
G15276 NA non-coding downstream 102699 32912229 ~ 32913566 (-)
G15273 NA non-coding downstream 104136 32897427 ~ 32912129 (-)
G15272 NA non-coding downstream 108130 32906029 ~ 32908135 (-)
G15249 NA non-coding downstream 220435 32795378 ~ 32795830 (-)
G15303 NA non-coding upstream 560 33019112 ~ 33040395 (-)
G15290 NA non-coding upstream 14618 33033170 ~ 33066563 (-)
G15319 NA non-coding upstream 111416 33129968 ~ 33130342 (-)
G15329 NA non-coding upstream 197856 33216408 ~ 33216763 (-)
G15330 NA non-coding upstream 200647 33219199 ~ 33219418 (-)
hopx hopx,LOC107552340 other downstream 195461 32814048 ~ 32820804 (-)
nfkb1 nfkb1,LOC106536450 other downstream 856302 32122222 ~ 32159963 (-)
G14839 NA other downstream 1960762 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 2092178 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 2093016 30914910 ~ 30923249 (-)
G15497 NA other upstream 1116040 34134592 ~ 34136732 (-)
evc2 NA other upstream 1133271 34151823 ~ 34172017 (-)
G15498 NA other upstream 1222774 34241326 ~ 34242318 (-)

Expression



Co-expression Network