G15330



Basic Information


Item Value
gene id G15330
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 33219199 ~ 33219418 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU20658
gttcagaaatcaatatttggtggaataatcctggtgtttgtgaatcacatttttttttttcatgcatcttggcatcatgttctcctccaccagtcttacacactgcttttggagaactttatgctgctttactcctggtgcaaaaattcaagcagttcagtttggtggtttgatggtttgtgatcatccatcttcctcttgattatattccagaggtttt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU20658 True 220 lncRNA 0.53 1 33219199 33219418

Neighbor


gene id symbol gene type direction distance location
nudt6 nudt6,LOC107690594 coding downstream 117593 33092865 ~ 33101606 (-)
kiaa0141 NA coding downstream 135023 33075133 ~ 33084176 (-)
LOC103027351 LOC108434533,LOC105893001 coding downstream 145818 33035849 ~ 33073381 (-)
LOC103028197 NA coding downstream 259359 32956131 ~ 32959840 (-)
LOC103029347 NA coding downstream 275606 32921025 ~ 32943593 (-)
ankrd50 ankrd50 coding upstream 81815 33301233 ~ 33348173 (-)
LOC103022214 NA coding upstream 679440 33898858 ~ 33909077 (-)
LOC103031787 drd5,LOC107701828 coding upstream 819991 34039409 ~ 34041114 (-)
otop1 otop1 coding upstream 825093 34044511 ~ 34055572 (-)
tmem128 tmem128 coding upstream 838380 34057798 ~ 34065048 (-)
G15329 NA non-coding downstream 2436 33216408 ~ 33216763 (-)
G15319 NA non-coding downstream 88857 33129968 ~ 33130342 (-)
G15290 NA non-coding downstream 152636 33033170 ~ 33066563 (-)
G15303 NA non-coding downstream 178804 33019112 ~ 33040395 (-)
G15300 NA non-coding downstream 195263 33013370 ~ 33023936 (-)
G15343 NA non-coding upstream 79244 33298662 ~ 33299321 (-)
G15363 NA non-coding upstream 281348 33500766 ~ 33501000 (-)
G15367 NA non-coding upstream 376734 33596152 ~ 33596393 (-)
G15443 NA non-coding upstream 574996 33794414 ~ 33794700 (-)
G15449 NA non-coding upstream 592599 33812017 ~ 33890830 (-)
hopx hopx,LOC107552340 other downstream 398395 32814048 ~ 32820804 (-)
nfkb1 nfkb1,LOC106536450 other downstream 1059236 32122222 ~ 32159963 (-)
G14839 NA other downstream 2163696 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 2295112 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 2295950 30914910 ~ 30923249 (-)
G15497 NA other upstream 915174 34134592 ~ 34136732 (-)
evc2 NA other upstream 932405 34151823 ~ 34172017 (-)
G15498 NA other upstream 1021908 34241326 ~ 34242318 (-)

Expression



Co-expression Network