evc2


Basic Information

Item Value
gene id evc2
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 34151823 ~ 34172017 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU20928
GGCCCATGGAGAGGCTACGTGAGCGGGGCCGGGACACTGCGGTCGCTCTGTGGGCGGCTCGGAGCTCCGCCCACCAGCGCAGAGAGGAGGAGCTGCAGCGGCAGAAGCACGTGCGACTCCGGCTGGACCGGTACTACAGGAGTGTGTTGGAGAGTCAGTGGGCGCTGTCGGAGGCGGAGCTTCTGCGGGTGAGGCTGGCGTGGGTCAAATGTGTATGTCAGGTAGATCGGTGTCTGGCACTCTCGCacgctctcgctctcgctcgACTGCACACCACACTGACCGACCACCCGGACCCTCGCACGGACCACCCGGATACTCACACAGACCACCCGGGCCCTCGCACGGACCACCCGGGCCCTCGCACAGACCACCCGGGCCCTCGCACGGACCACCCGGGCCCTCGCACGGACCACCCGGGCCCTCGCACAGACCACCCGGACCCTCGCACAGACCACCCGGACCCTCGCACACAGAAGGTGGTAGTGAATACAGAGCGCCCCCTGGAGGCTTCACGGAGTGGCCACTGCAGAACTGAG
>TU20930
GGCCCATGGAGAGGCTACGTGAGCGGGGCCGGGACACTGCGGTCGCTCTGTGGGCGGCTCGGAGCTCCGCCCACCAGCGCAGAGAGGAGGAGCTGCAGCGGCAGAAGCACGTGCGACTCCGGCTGGACCGGTACTACAGGAGTGTGTTGGAGAGTCAGTGGGCGCTGTCGGAGGCGGAGCTTCTGCGGGTGAGGCTGGCGTGGGTCAAATGTGTATGTCAGGTAGATCGGTGTCTGGCACTCTCGCacgctctcgctctcgctcgACTGCACACCACACTGACCGACCACCCGGACCCTCGCACGGACCACCCGGATACTCACACGGACCACCCGGGCCCTCGCACGGACCACCCGGGCCCTCGCACGGACCACCCGGACCCTCGCACACAGAAGGTGGTAGTGAATACAGAGCGCCCCCTGGAGGCTTCACGGAGTGGCCACTGCAGAACTGAG
>XM_022676967.1
tttcTAAACTGCAGTCGGAGCTGGCAAGATGGCGGCGTGGAGCTGATCGGGAGTTCGGGGCCAAATCCGGATTCGGATCTGGATATAGATTCGGTTTGTTTGCACGCGGGAACCACACCTGAGCTGATGAACTGAAACCGGTCCGATTCTGCGTCTCCAGGTTAAATGCACTTCCTCGCCACAGTCTTCCTCACGGTGGTGCTCCTGGAGAGCGGCACCTGCAGGACAGGTGTGGAATCTCAGGAGAACCAGGTGCTTAGAACCAGACAGAGAGAATCACAGCACACACTGCCTCAGATCCAGACTATGGCTCCGCCCCCCGCATTCAGCCTGGAGTTCCACAAGTGTGCCGAGGTTGAAACAGGAAGTGATGCTCTGCAGGTGAGCTTCTACCTGCTCATCTCTAACCCGGCCGAGGGAGTCGACCTATCACAGCTCAGCATTCGCGACACTGTCTCTGACATCACACTCCTGCAGAGCAGCGGCAGCATCCAGCAGAGAGGAAACCAGATCTTTACCACACACTCACTGcctgctggcTCCAGGTATGAGGTGCGGTACACAGCGAGTGTGAGGGGCAGTAAAAACGAGGATCTGTTTCTACCAGCCCTTCTCACCTTTTCCAACACCTCACAGAATGAGATTAACCTGTTTGGACCTGTAGTGGCAAACTTCACTCTGAGATTAAACACTACTgagaaggtgtatGTGAATCATGCGCTGCACCTGGCTGGTTTCTGTGGGGCGCTCCTGTTCTCCACACTGCTGTTCTCCCTCACCCTGATCTCCACCAGCTACCTGCACACCCGCCTCCTCACCCCCCAACAcaggAGGAGGAGGGGCCTCCGTGGAGGGGTGGAGACAGTGGAGGGCGTGTGTAATGTCAGCGAGTCAGCCAATGAGGAGGCGGAGTTTGAGGATAAAATTGTGGACATCATGGCATTGGAGGATCCACAGAATATGCTGCAAACACTCGACAAtctggaGATGTCCACTCTCCTGCGGGGGGCGCTgtgggtggagtgtgtgagggtgcaGTTGGTGAGGGGCGTGTTCAGGGTGCTGCTGGGCGGGGCTGGGGAGGCGGGGCATAGGGTGGAGGCGGTGCTGTTGGGTCAGGTGACTGGTATGGAGGGAAAGCTGCAAGAGGAGCAGGGGGCGTGGCTAACCTCAGTCGCCCACTGTTCCACTAAGACCCAGCAGGAGATGGAGCTGCACCAAACACACTCCGACAAACTGTTACAGCATGCTGATCACCAggaGGAGCTGGAGTGCAGGGAGCTGCTGGAGAAGTTGCGGGCGCTGGAGCGGGGGCGGGTACAGCGGGCGCTGTGGGCGGGGCGAGACCGGGCGACGGCTCGGGCACAGAGACACATGGCCGTCCGGCGACGGGTCGAGCTGCACGCCACCTTCACCGAGGAGCTGCAGGAGGCGGCCAGAACCGGAGAACTGTACCCGGACACGGCCAACGCCCTGCTGCACCAGTACTACACCTGCCAGAATCAGCTGGAGGAGGTGCTTGATGTGTATGTAGCCAATCAGAGGGCAGCTGTGCGCGAGCGACAGGCGCAGCGGCGGTTTCTGGTGGAGGGTCTTCAGGACCTGCAGGAGGTGCTGTCTCACACCCTCAGCTCCTCCTCCATCATCATCCACCGCTGGTTCACTGAGATACGCAGggacGGTGTGCTGAATGGTCAGCAGTGTGAGGAGCAGTTGGAGCGCGCTCAGTCGGAGCTGCTGAGGGTTAAACAGTCGTTAGAGGAAACTCTGGCCCGGCAGTGCAGCACTGCCCACTGTGACATCATCAAAAGGAGGCGGGGCCGTATCTCTGAGGTGctgtgtgaGCAGAAGCGAGAGCAGCAGgagttggagtgtgtgtgtgagggtccGGTGGGTCGGTATTTGTCTCGATGGCAGACGCTCCTCTcctctcacaccacacactactcTGAACTCCTCACACACCTCGACCAGGAGGCAGCGGGGGAGATACgcaagGTGGTGCTGGCGGTGCTGCAGGAGGCGGGGCTTGAGCTGGGGGCGGTGGGTGAGGGGGTGTGTCAGTCTCTGCATGCTCTGGGGGTCCCGCGCTGGCTGCTGCAGCGGGACGTGGGGGGCGGGCCCATGGAGAGGCTACGTGAGCGGGGCCGGGACACTGCGGTCGCTCTGTGGGCGGCTCGGAGCTCCGCCCACCAGCGCAGAGAGGAGGAGCTGCAGCGGCAGAAGCACGTGCGACTCCGGCTGGACCGGTACTACAGGAGTGTGTTGGAGAGTCAGTGGGCGCTGTCGGAGGCGGAGCTTCTGCGGGTGAGGCTGGCGTGGGTCAAATGTGTATGTCAGGTAGATCGGTGTCTGGCACTCTCGCacgctctcgctctcgctcgACTGCACACCACACTGACCGACCACCCGGACCCTCGCACGGACCACCCGGATACTCACACAGACCACCCGGGCCCTCGCACGGACCACCCGGGCCCTCGCACAGACCACCCGGGCCCTCGCACGGACCACCCGGGCCCTCGCACGGACCACCCGGGCCCTCGCACAGACCACCCGGACCCTCGCACACAGAAGGTGGTAGTGAATACAGAGCGCCCCCTGGAGGCTTCACGGAGTGGCCACTGCAGAACTGAGAacagcAAGCTCACACacgcactgcacacacacagcctgGCTTTAGAGGAGGTGGAGCTTCAACTGCAGAAGGAGGAGTCTGAGTGGGAGGAGTTAGCATTTGGGCGGAGCTCTGATCACATGCTGattgatgaggaggaggagcttcTCAGTGTGGATAAAACCCGCAGCATCGCCACCAACCTGCAGGAGGCGCTCTACAAGAGAcagcagctcacacacacactcactgacaggtTGCAGGAGGCAGTTCGGAGGCGGCAGGTTATAGAGGACCTAAGGGACCAACTGGAGCTGAAGCAACTTTACACACTCTGTGACCAGgatgtGCTGTTATGTGGGGAGCTGGTGAAGATCTGTGGTGTTTCAGACACGGTTCTCCAGAAGATCCTGCGGCTCCTGCTGCCTACAGTACCTGATGGAGAACTACAGTCGCTCACAGACACACTTAGTTCTAATgcaagGAGGGCAGCTGGACCCTGCAGAGAGCTGGTGGACGGACTGAGGAGTGACATCATCAGTAAAAACCTGTCGCCCTGCTCTCGGCTCTcagtcagagagacagacagGCTCCTGAAGAAGAAGCAGACCCTGGTGGAGAACCTGTTCTCTggttctgctggatctgctaaAGGTGGGCTGAAGGTTTGGGAGCAGGAGGACACGCCCCCTGCTGCACAGGGGGTGGCGCCCTGCCTTCTGGCCCCTGCGTCCGTCCAGGCAGGGGAGGGGCCTGGGGTTAGTCCCAGGCCAGTAATGGGAGGGGCCAGTGGGGAATGGGTGTGGCCAACAAACTGCCCACGTGGTGATGAGGTGGGTGTGGCCATCGAGAGTACGATGTCTGGACAGAGACTGTTTGTTTCCTGCAGCCCCCCACCCCCAAACCAACCCACTGAGCACCCCTCACCCCCCTCACTCCCCTTACTTCACACCCACAGGAAGAGGAGGAGCTTCCTGGGCTTCAGAAATAGGAGTGTAGCTCCTGAGGATCAGACATGAAGGAAAATATAAATCTGTAAAATTCAAAGTttgtaataaagttttttatttgtgtaaatgtgaaaa

Function

GO: NA

KEGG:

id description
K19608 EVC2; ellis van creveld syndrome protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
TU20928 False 539 TUCP 0.68 3 34162123 34162958
TU20930 False 455 TUCP 0.67 3 34162123 34162958
XM_022676967.1 True 3702 mRNA 0.59 23 34151823 34172017

Neighbor

gene id symbol gene type direction distance location
cytl1 NA coding downstream 15251 34134586 ~ 34136572 (-)
stx18 stx18 coding downstream 48449 34090634 ~ 34103374 (-)
lyar NA coding downstream 73534 34071903 ~ 34078289 (-)
tmem128 tmem128 coding downstream 86775 34057798 ~ 34065048 (-)
otop1 otop1 coding downstream 96251 34044511 ~ 34055572 (-)
LOC103038859 NA coding upstream 13611 34185628 ~ 34190394 (-)
crmp1 NA coding upstream 19130 34191147 ~ 34198885 (-)
LOC103041332 NA coding upstream 41747 34213764 ~ 34216327 (-)
mcm7 mcm7,LOC107716516,LOC107744067,LOC107665623 coding upstream 47926 34219943 ~ 34228034 (-)
LOC111194046 NA non-coding downstream 15134 34134586 ~ 34136689 (-)
G15486 NA non-coding downstream 109464 34041722 ~ 34042359 (-)
G15454 NA non-coding downstream 227815 33923606 ~ 33924008 (-)
G15452 NA non-coding downstream 260720 33833697 ~ 33891103 (-)
G15449 NA non-coding downstream 260993 33812017 ~ 33890830 (-)
G15512 NA non-coding upstream 2183 34174200 ~ 34175378 (-)
G15513 NA non-coding upstream 5184 34177201 ~ 34178567 (-)
G15516 NA non-coding upstream 22758 34194775 ~ 34195228 (-)
G15503 NA non-coding upstream 28991 34201008 ~ 34253713 (-)
G15499 NA non-coding upstream 31513 34203530 ~ 34243927 (-)
G15497 NA other downstream 15091 34134592 ~ 34136732 (-)
hopx hopx,LOC107552340 other downstream 1331019 32814048 ~ 32820804 (-)
nfkb1 nfkb1,LOC106536450 other downstream 1991860 32122222 ~ 32159963 (-)
G14839 NA other downstream 3096320 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 3227736 30923812 ~ 30924087 (-)
G15498 NA other upstream 69309 34241326 ~ 34242318 (-)

Expression


Co-expression Network