G7057


Basic Information

Item Value
gene id G7057
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 1037277 ~ 1037489 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU9620
tatataggtagatagatagaaaaggggatgatatataggtagatagatagaaaaggggatgatatataggtagatagatagaaaaggggatgatatataggtagatagatagaaaaggggatgatatataggtagatagatagaaagggggatgatatataggtagatagatagaaaaggggatgatatataggtagatagatagaaaagggg

Function

GO: NA

KEGG:

id description
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU9620 True 213 lncRNA 0.40 1 1037277 1037489

Neighbor

gene id symbol gene type direction distance location
gtpbp1 gtpbp1,LOC107582974 coding upstream 465699 554179 ~ 571578 (+)
LOC111193015 NA coding upstream 487535 540319 ~ 549742 (+)
trnal-uaa NA coding upstream 499380 537815 ~ 537897 (+)
trnal-caa NA coding upstream 504065 533130 ~ 533212 (+)
trnal-uag NA coding upstream 504424 532771 ~ 532853 (+)
LOC103025552 nacc1,LOC103025552,LOC107690702,LOC107737738,LOC103910274,LOC107554144,LOC107689628,LOC105892190 coding downstream 38493 1075982 ~ 1103227 (+)
ier2 ier2 coding downstream 80012 1117501 ~ 1119058 (+)
alkbh7 NA coding downstream 291753 1329242 ~ 1335034 (+)
LOC103038420 aldh3b1,LOC108444046,LOC107698763,LOC108258475,LOC107601228 coding downstream 981272 2018761 ~ 2030541 (+)
timm29 NA coding downstream 1064221 2101710 ~ 2104856 (+)
LOC111194143 NA non-coding upstream 1320 1035072 ~ 1035957 (+)
G6939 NA non-coding upstream 438227 598561 ~ 599050 (+)
G6929 NA non-coding upstream 460921 544622 ~ 576356 (+)
G6928 NA non-coding upstream 462653 544434 ~ 574624 (+)
G6895 NA non-coding upstream 656337 380604 ~ 380940 (+)
LOC111194145 NA non-coding downstream 891 1038380 ~ 1040771 (+)
G7106 gtf2f1,LOC107737737 non-coding downstream 299750 1337239 ~ 1349486 (+)
G7108 NA non-coding downstream 301433 1338922 ~ 1339539 (+)
G7201 NA non-coding downstream 1089487 2126976 ~ 2128296 (+)
G7205 NA non-coding downstream 1109928 2147417 ~ 2148305 (+)
G6995 NA other upstream 334957 700764 ~ 702320 (+)
G6901 LOC108436678 other upstream 599889 413131 ~ 437388 (+)
G7109 NA other downstream 302717 1340206 ~ 1345431 (+)
LOC103037883 LOC105898698,LOC103360086,LOC101074561,LOC107391594,LOC102794576,LOC103154361,LOC100701095,LOC105938735,LOC105901802 other downstream 1001898 2039387 ~ 2047563 (+)
carm1 carm1 other downstream 1012794 2050283 ~ 2080541 (+)
G7296 sept9,LOC108411966 other downstream 1493127 2530616 ~ 2558344 (+)
LOC111193069 dlx4a,LOC108432421,LOC107688148,LOC107590410,LOC107689696,LOC107753083 other downstream 1787639 2825128 ~ 2842214 (+)

Expression


Co-expression Network