G7201


Basic Information

Item Value
gene id G7201
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 2126976 ~ 2128296 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU9807
CAGCTCATCGCCCACTTTAATGGCACAAAATGGCGTTTATAAATTACGATTTATCTACATTCTTTTGGCATTGTTATAAAAAACCCCTCCTAACTGTTTTGtggattgtatttttttccttcacaGATTGGCAGACAAATGGGTGAGTACAACTCATGCAGGAGTTGTCTTTATGTTTCTTTAGGTTACATTAATGAATGTAAAAAGTGGAATGTAAAATTCCATTACAttccacacctgtataaataaaagcttaatatGGTGGTAAATTTTATTTTCTAGAGAAACTTGCAATGTCAGAATTGGTTACAGTGTTGTTGTTTCAGATGTCTGAAGAATGTAATGCCTCTGCTACAAGAAATACACTGATCAATACTTGAGACACTGCTTTAGATGGTTCTATTACACCTTTGAGATAAggtttttgctctgtttttattttaattcgtTTTCACACCTAAAATGTTAAGTCCAGTTAAATCAGACTCAAACTCATTTTCAGCCATGGTGGGACTTATCTGGGCAGGTGTACAGTAAtcgttttgtgttgtgttgtaatgCATTTTGTTGTTCTTGGTTTATTCCGTAtctgaaaaaacaaaccaattagggtttataaacttgtttacGGATTTGGGCAAAGCAAATTAACCATATGTGAtaccaatttggtaaaatagctttaaatttaaaagctttgtaactgattcagaccagagcaaACAACCTATAGGTATGACAACATCCTAAAGGAAACGCTTCAACTTGCCCAGTTGGGGTAGTTCTAAAAGAACTAAGACATATTCAAGTACTGTGCAGAATAAAATTAGAAACATCCTATTAGAATGACTAGATAGAACGCTGTGGCTAtagttatttaatgttaaagtGTTCTTCAGTGAGATTAAGCTATGATGGTATGACAGACATAATGAGTGATATGGATGTTTAACTCtaattgtgtaaaatgtaaatttgaaaaatatgtCATATTGAAGGTACAACACATAGAATTCTATCTAGCAGGGGAATTGGTGATATGATTTTGTGCAGTTCTTATAATGAGCCAGCTTCCCGGTAGTCACAATGCCGGGAATGTTAAAGCGTAAAAAAAGCTATAGAAAATATGGTtctatgtaataacaaaaatgGCCACACAAATGGTCAAATTGAGGAACCGTTCTTACGCATAGTGTAGATTCACTGGTGCTTTTGAATAGTAAATAACATCTGTGGAATTCCCCTTTGCCTTCTGTTACTAAAGTGTTTTAATGTACATGCATCAAATTGGttcaataaaaagagaaaaattaaaTTCTGA

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9807 True 1321 lncRNA 0.34 1 2126976 2128296

Neighbor

gene id symbol gene type direction distance location
timm29 NA coding upstream 22120 2101710 ~ 2104856 (+)
LOC103038420 aldh3b1,LOC108444046,LOC107698763,LOC108258475,LOC107601228 coding upstream 96435 2018761 ~ 2030541 (+)
alkbh7 NA coding upstream 791942 1329242 ~ 1335034 (+)
ier2 ier2 coding upstream 1007918 1117501 ~ 1119058 (+)
LOC103025552 nacc1,LOC103025552,LOC107690702,LOC107737738,LOC103910274,LOC107554144,LOC107689628,LOC105892190 coding upstream 1023749 1075982 ~ 1103227 (+)
LOC103036529 LOC108444037 coding downstream 25036 2153332 ~ 2160858 (+)
LOC103039361 slc25a23b,LOC108444036,LOC107601238,LOC107698653,LOC107724434,LOC107689624,LOC108274688 coding downstream 32519 2160815 ~ 2204579 (+)
LOC103039045 znf207,LOC108444040,LOC108278632 coding downstream 85625 2213921 ~ 2223268 (+)
LOC103036218 NA coding downstream 102354 2230650 ~ 2243514 (+)
LOC111194261 NA coding downstream 364278 2492574 ~ 2495082 (+)
G7106 gtf2f1,LOC107737737 non-coding upstream 777490 1337239 ~ 1349486 (+)
G7108 NA non-coding upstream 787437 1338922 ~ 1339539 (+)
LOC111194145 NA non-coding upstream 1086205 1038380 ~ 1040771 (+)
G7057 NA non-coding upstream 1089487 1037277 ~ 1037489 (+)
LOC111194143 NA non-coding upstream 1091019 1035072 ~ 1035957 (+)
G7205 NA non-coding downstream 19121 2147417 ~ 2148305 (+)
G7219 NA non-coding downstream 79135 2207431 ~ 2207730 (+)
G7292 NA non-coding downstream 261920 2390216 ~ 2398641 (+)
G7291 NA non-coding downstream 265332 2393628 ~ 2400307 (+)
G7294 NA non-coding downstream 286328 2414624 ~ 2414848 (+)
carm1 carm1 other upstream 46435 2050283 ~ 2080541 (+)
LOC103037883 LOC105898698,LOC103360086,LOC101074561,LOC107391594,LOC102794576,LOC103154361,LOC100701095,LOC105938735,LOC105901802 other upstream 79413 2039387 ~ 2047563 (+)
G7109 NA other upstream 781545 1340206 ~ 1345431 (+)
G6995 NA other upstream 1424656 700764 ~ 702320 (+)
G6901 LOC108436678 other upstream 1689588 413131 ~ 437388 (+)
G7296 sept9,LOC108411966 other downstream 402320 2530616 ~ 2558344 (+)
LOC111193069 dlx4a,LOC108432421,LOC107688148,LOC107590410,LOC107689696,LOC107753083 other downstream 696832 2825128 ~ 2842214 (+)
G7593 LOC107551170,LOC107729520,LOC107687640,LOC108434904,LOC100304518 other downstream 1320925 3449221 ~ 3452666 (+)
natd1 natd1,LOC107745813,LOC107689058,LOC107661164 other downstream 1795989 3924285 ~ 3929242 (+)
atp6v0a1 atp6v0a1,LOC108444241 other downstream 2624500 4752796 ~ 4802501 (+)

Expression


Co-expression Network