G7205


Basic Information

Item Value
gene id G7205
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 2147417 ~ 2148305 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU9818
ggacgccacgctctgtgactcccgtggctcatccgcgctccgagaagctcgcggctgaggctccgcgctccgagacccccgcagctcatccgcgctccgagaagctcgcggctgaggctccgcgctccgagacccccgcggctcatccgctccccgagacttcagcggtggCCGCGCCGTCCCCCGAGAAAGCGcaggcggcagcgccgctctctgaagctccggctaagctagctagcctgctagctccaccgcgctctcaagccccacctgcttccagctctccagcccggccggattCCAGGTCTGCGACTCCTGCTCCAgaagcaagctccggtccggtTTCTACAGCCTCGCCCACTGCTGAATCTGCGGTTCCAGGCCGGATCTTggcggcagccgcactctcaGCTCCCGCTGAATCGGCGTCTTCGCCAgctgtatcagcgctgcccgcggctccggccgcctctgtatcagcgctgcccgcggctccggccgcctctgaccctgttcccgcggctccggccgcctctgactctgtgcccgcggctccggccgcctctgactctgtgcccgcggctccggccgcctctgactctgtgcccgcggctccggccgcctctgactctgtgcccgcggctccggccgcctctgactctgtgcccgctgcCACCCCAGTTcatgtgccagcggtgcccgccgctcctgtgtctgcagtgcctgccacccacgtggtacccactgcttcagctccagtgccagcggtgcccgccgctcCTGTTCCTGTACCTGCTCCAAGAACAATGTTTGGCCCTAGGCCCCGTGTCCCTAGGCCAGcaaggcctcctgactttgGCCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9818 True 865 lncRNA 0.70 2 2147417 2148305

Neighbor

gene id symbol gene type direction distance location
timm29 NA coding upstream 42561 2101710 ~ 2104856 (+)
LOC103038420 aldh3b1,LOC108444046,LOC107698763,LOC108258475,LOC107601228 coding upstream 116876 2018761 ~ 2030541 (+)
alkbh7 NA coding upstream 812383 1329242 ~ 1335034 (+)
ier2 ier2 coding upstream 1028359 1117501 ~ 1119058 (+)
LOC103025552 nacc1,LOC103025552,LOC107690702,LOC107737738,LOC103910274,LOC107554144,LOC107689628,LOC105892190 coding upstream 1044190 1075982 ~ 1103227 (+)
LOC103036529 LOC108444037 coding downstream 5027 2153332 ~ 2160858 (+)
LOC103039361 slc25a23b,LOC108444036,LOC107601238,LOC107698653,LOC107724434,LOC107689624,LOC108274688 coding downstream 12510 2160815 ~ 2204579 (+)
LOC103039045 znf207,LOC108444040,LOC108278632 coding downstream 65616 2213921 ~ 2223268 (+)
LOC103036218 NA coding downstream 82345 2230650 ~ 2243514 (+)
LOC111194261 NA coding downstream 344269 2492574 ~ 2495082 (+)
G7201 NA non-coding upstream 19121 2126976 ~ 2128296 (+)
G7106 gtf2f1,LOC107737737 non-coding upstream 797931 1337239 ~ 1349486 (+)
G7108 NA non-coding upstream 807878 1338922 ~ 1339539 (+)
LOC111194145 NA non-coding upstream 1106646 1038380 ~ 1040771 (+)
G7057 NA non-coding upstream 1109928 1037277 ~ 1037489 (+)
G7219 NA non-coding downstream 59126 2207431 ~ 2207730 (+)
G7292 NA non-coding downstream 241911 2390216 ~ 2398641 (+)
G7291 NA non-coding downstream 245323 2393628 ~ 2400307 (+)
G7294 NA non-coding downstream 266319 2414624 ~ 2414848 (+)
G7298 NA non-coding downstream 313787 2462092 ~ 2462366 (+)
carm1 carm1 other upstream 66876 2050283 ~ 2080541 (+)
LOC103037883 LOC105898698,LOC103360086,LOC101074561,LOC107391594,LOC102794576,LOC103154361,LOC100701095,LOC105938735,LOC105901802 other upstream 99854 2039387 ~ 2047563 (+)
G7109 NA other upstream 801986 1340206 ~ 1345431 (+)
G6995 NA other upstream 1445097 700764 ~ 702320 (+)
G6901 LOC108436678 other upstream 1710029 413131 ~ 437388 (+)
G7296 sept9,LOC108411966 other downstream 382311 2530616 ~ 2558344 (+)
LOC111193069 dlx4a,LOC108432421,LOC107688148,LOC107590410,LOC107689696,LOC107753083 other downstream 676823 2825128 ~ 2842214 (+)
G7593 LOC107551170,LOC107729520,LOC107687640,LOC108434904,LOC100304518 other downstream 1300916 3449221 ~ 3452666 (+)
natd1 natd1,LOC107745813,LOC107689058,LOC107661164 other downstream 1775980 3924285 ~ 3929242 (+)
atp6v0a1 atp6v0a1,LOC108444241 other downstream 2604491 4752796 ~ 4802501 (+)

Expression


Co-expression Network