G7291


Basic Information

Item Value
gene id G7291
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 2393628 ~ 2400307 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU9933
AGAAACAGGGGTACAtaccacgttagcgcgtggagtactctccacgcgctgtcccagaGCAGACGCTTGAGCAGAATTGGGCCGGAGTTCACAGTTAGCCCTTAGATGACCTGGACCACCACAATAGAGGCACAGGTGAAGGCGTATGCGACGCTGCCTCTCAGCGACGGATAGTCTGGATCGTGTGATGTCCATGGGCTCAGGGCTGGGTGCAGGCACAGATTCCGGAACTGGATTCCCGGACTGGAGTAGTGCAGGGCGAACCACAGGAGTGTGGCTAACAGCTTTGGGCTTACGGGAAAGGAGCTGATCCAGACGGATAGACAGAGCGATCAGCTGATCCAGGGTGAGTGAGTCGTCCTTGCATGCAAGTTCTCTTTGAATCTCGGGGTTAAGTCCGTGTCGAAACATGGAGATGAGAGCAGGGTCGTTCCAACCGCTGCTAGCGGCTAACGTACGGAACTCCAGAGCAAAGGCTGCCACAGATAGTTTACCTTGCTTCAAGGAAATCAGAAGCTCTCCACTAGATTGCCCATAGCGTGTATGATCAAAAACGCTgcgaaaaatagacaaaaaagtgtCGTAGCTGGATTCAGAAATGCTCTCCCAAATCGCTGTAGCCCAGTCCAAAGCCTTGCCAGACAACCGAGAAATTATAAACCCGATTTTAGCTTTATCAGAAGCAGGAGGTGAGTTGCTAAAAAACACGGAGCACTGGAGCAGAAATCCATTACACTTCTCAGTGTTACCGTCATAGACCTCTGGTTTACACACAGCGAAAAAGGGAGTAGTGGGTTTGTTAGGACTGGCTACAGGGCTAACCACTGGGCTAGGGTTCTGGGTGGACAAACCCCGGAGGTGACTCATAATATCggctagctgctgctgttggttaaCCTGGTGGCGTGCTAGCTCAtcaacagcttgggtcacaccagcgagcgtttgctggtgctgacctaGAAGCCGACCCTGGTTAGCCAAACCAGACTTAATAGACTCTGTATCCGCAGTCTCTGTCATTACGGCCGAGTAtcttgtcagggccagacaggaatgagactggtgcagatacaataaaataacttttattaaagttatagagtagacaggggtagtcaacagaaacagggtcagtaccaaaaatgcacagtgtagagaaaccataccataaccggaggacagtccagagttcatacacgggtaggcagtatcacagggtaggcaaaaatccagagtacaataaacagtccaggtcatacacggtaatccaacacaagggagcaggcaaaaatcaaagtcggtagaaaacaaaaacaagatcatacacggagaatagcaagggcaagagaaacgctttgtattgtaggatttaccaaacagatactcggcgaggtgtgagcgtgagcatggtccttaaatactctgagtaatcagtactcggggcttcctggtggcgtcatgtgacgtgtcatgtgatcgggagtgtgtgttgtgtcatggagtggtgcgttctgggtattgtagttgttactgtgagaatcgcagatagagctggatgtgggagacacagatgtgctttcagcaccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9933 True 1591 lncRNA 0.50 2 2393628 2400307

Neighbor

gene id symbol gene type direction distance location
LOC103036218 NA coding upstream 150114 2230650 ~ 2243514 (+)
LOC103039045 znf207,LOC108444040,LOC108278632 coding upstream 170360 2213921 ~ 2223268 (+)
LOC103039361 slc25a23b,LOC108444036,LOC107601238,LOC107698653,LOC107724434,LOC107689624,LOC108274688 coding upstream 189049 2160815 ~ 2204579 (+)
LOC103036529 LOC108444037 coding upstream 232770 2153332 ~ 2160858 (+)
timm29 NA coding upstream 288772 2101710 ~ 2104856 (+)
LOC111194261 NA coding downstream 92267 2492574 ~ 2495082 (+)
LOC111194262 NA coding downstream 94996 2495303 ~ 2495956 (+)
LOC111193070 NA coding downstream 487314 2887621 ~ 2902359 (+)
LOC111193073 LOC108412732 coding downstream 502768 2903075 ~ 2918837 (+)
LOC103026461 LOC103026461 coding downstream 573706 2974013 ~ 2975368 (+)
G7219 NA non-coding upstream 185898 2207431 ~ 2207730 (+)
G7205 NA non-coding upstream 245323 2147417 ~ 2148305 (+)
G7201 NA non-coding upstream 265332 2126976 ~ 2128296 (+)
G7106 gtf2f1,LOC107737737 non-coding upstream 1044142 1337239 ~ 1349486 (+)
G7294 NA non-coding downstream 14317 2414624 ~ 2414848 (+)
G7298 NA non-coding downstream 61785 2462092 ~ 2462366 (+)
G7300 NA non-coding downstream 89785 2490092 ~ 2490313 (+)
G7306 NA non-coding downstream 111823 2512130 ~ 2512338 (+)
G7307 NA non-coding downstream 112745 2513052 ~ 2513286 (+)
carm1 carm1 other upstream 313087 2050283 ~ 2080541 (+)
LOC103037883 LOC105898698,LOC103360086,LOC101074561,LOC107391594,LOC102794576,LOC103154361,LOC100701095,LOC105938735,LOC105901802 other upstream 346065 2039387 ~ 2047563 (+)
G7109 NA other upstream 1048197 1340206 ~ 1345431 (+)
G6995 NA other upstream 1691308 700764 ~ 702320 (+)
G6901 LOC108436678 other upstream 1956240 413131 ~ 437388 (+)
G7296 sept9,LOC108411966 other downstream 130309 2530616 ~ 2558344 (+)
LOC111193069 dlx4a,LOC108432421,LOC107688148,LOC107590410,LOC107689696,LOC107753083 other downstream 424821 2825128 ~ 2842214 (+)
G7593 LOC107551170,LOC107729520,LOC107687640,LOC108434904,LOC100304518 other downstream 1048914 3449221 ~ 3452666 (+)
natd1 natd1,LOC107745813,LOC107689058,LOC107661164 other downstream 1523978 3924285 ~ 3929242 (+)
atp6v0a1 atp6v0a1,LOC108444241 other downstream 2352489 4752796 ~ 4802501 (+)

Expression


Co-expression Network