tmem114 (tmem114)


Basic Information

Item Value
gene id tmem114
gene name tmem114
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 28633776 ~ 28662302 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245546.3
gaggatcaTTTATAGTGGTCTGTTAATAGAGCACACTGCCGCCTCCTGTTCACAACCCCACACTGCAGTAAagaccctcacacacacaccagccacacacacacaccctcacacactcacacaggcgctccagctgctctcactgctgtTCTGTACTCAGCCTGGAGCCCACAGGAGACCCTCAGCTCTGAGGATGAAGCTCACTCTGGGGGGGCTGGCTGTGTCTGTGGCCTCTTTCGGGGTCCTGAGCTTCGTGTGTCTGATTCTGGCCATTGGGACGGATTTCTGGTACATTATTGACACCTCTAAAAGAGACACCAACTCCTCTGTTCCTCTCAGCTCACACTCTGGACTGTGGAGGACCTGCAACCTTCAGAACCAGTGCTGGCCGTTTATGAATCCATTCAGGAATGGAAGAAACTTCACAGACTCTCAGAGGCAGATACTGAACATGCAGGGGGCCTTCATGGTGCTGCTGCCCCTCAGCGTGATCGTGTTGTTCGTCGGGGGGATGCTGGGCGTCATTAGCATGCTGGCCCGGGCCCACCCGCTGCTGCTGGCGACCGGACTGCTGCTGATGTGTGGCGCTGCCGTCACTCTGACCGGTATCTGTGTGTACGTGGCCTACTCGGCTGCAGCCTTCCGGGAAGCCGTGTGCATCTCCGGCCACAAAACTCTGGAAAACATCAGCATCTACTTCGGCTGGTCTCTGGTCCTGGCTGCCATCTCCTGCTTCAGTGAGCTGCTCACAGCCATCGCGTTCCTGGTGGCATCAGCGCGGGTGGGCCAGCTAACGCAACAGGAGGATGATGACTGCTATCCCGGGGAGTGAGATGCACAGCGGGAAtcagagtaaataaaatatagaggTTTGGGTACAACTGTAAAAactatgaaaactgtgaaaagtggcgtttttactgtttaaatcgAGTGAAGCAACGTTTGGTCCATCCTAGCTCTGAGGAGAGTCTTGGTAGAAagagcatcacactgaacacactctcTACTGTATTAAAGATGATATTAATGCTAAAATAACTAGGAGAAACTAATGcttatgttcacacagcaggtaaaagtggccaaGATCTGATATTTTACATCATATGTAACACAAATGGGTAAATTTGTGGctgtttaaacagcaaaaaacacataaaatctaacatttttaattctgATTTGGGTCACATCAATGTGGCGCTAGCAGTTAAAACCAGACGTGATtgataatgccttctataaCGTAATCAGAGTGGATGTTGCATTGAGCCCATGCAGTATCAGGCCTCGCTCCTGCTCTGATAATTCACATTTTCTATAATTATCCATCTTACTTTAGAAGAAAAGCACCAGTCTCGATAGAGTcaataaaaatagatatttttataGATCTCTTAAATGATAATTCTGTCTATTTAAAAGGATTAACTTAGCTTatcttagcttagttagcttagccaCAGTGTTTTGTCAATCGATTTCTACTAACTGACATGTGCTTTTGCCGGCTCTGTGCGTACACAAGCCCATAGTTGTTTTTCAGATGTTTTCCAtgtgttttaattcatttgtgAAAATTCAGTGTTTCTCTGGTGTATTAAATTAGCGCCCATTCCAACAGTAGAGAGTGTTTAAATACCGTATcagctttttattaaaacagctttccgtatatgtattttattagcttagctacccagctaagatttttctgttcatttattaGTAGAGAACTCACAAATAGCATATCtgctttttttatgaataaCTTAGAAAAAcgaaggctatgttcacacagcaggtaaaagtggcccaaatctgatctgatctgatccgATTAACATATGCTAGACAGATAGGTCATTTTGTGGCtgtataaacagcaaaaaacacattaaatctattttttttatttctgatttgggtcaaatcAATGTGACACTACCAGTTACAACCAGACGTGATTGGTAATGCCTTATATAGCATACAGTATTTCTAGACAATGTTACACTGAACTTTGGAAATGGAATTTTACTCTGATAATTTACATCTTCAACATTTATCCATCTAACTTTAGAAGAAAAGCCCCAGTAcctaaataaagttaataaaatagatatatgttttttgatGTCTTAAATGATAATTCTGTCTATTTAAAAGGAATCAGATTTACATAGTGCTAATCACATCTCAGCTAGATTAGCTTACCTTAGCTtatattagcttagcttagtttagcttagcttagcttagcttagccacaGTGTTTTGTCAATCGATTTCTACTAATCGATATATGCTACTTGGAGTCTCTGTGCGTTCACCCACCCACATTTGTATTTTAGAAGTTTTCATGTGTTctaattcatttattataattcagtTTATCTCTGCTGTATTATACAATCTGAGCTTACTAACAAGCTAGTAAATTAGCACCCATTCCAACAGTAGAGAGTGTTTAAATACCATATcagctttttattaaaacagctttCCGTATAGGTATTTTATTAGCTTAGCTACCCAGCTAAGAGGTCACTGCTCATTTCACCAATATAGAACTCACAAATAGCATATaggctttttttattaaaaggaaAGAAGGGACACTAATTTGTTAGCTAGGTAACTAAGAAAGGCTAAGAtctgtattacagtctgtaatgGATTCTAGCTAAGCTAAGACTATGCTAAATGTTATGCTACATTCATGTGCTTAATGGATGATGCGTTTCTTTGAGGTGAAAGTTGTTCACCCGACTTGGTTGCCTTCATTTGGTTtctgtatttttagtttttatttattttaagctaAATAACATATGTTGTTTGTAGATgtcttaaaaatgtgttaatatttTAGAATTAACAGGCAAAAagtatttgtatattttcaCTCACTGGTCAGCTTGTGCTGCATCTAAAATGTTGATGAGCCTGGTTTGAGTATCTCACGTCAGAGGGTGTTCATGTGGTGTTCCTGGTGGGAAACTTGTCTTTACAATAAAATCGACACCACAGGAATGCAGCATTACATTCAGAAATGTGCACAGGTTGTGTTAGTGCTAGCAAAGTATggcagctatatatatatatatatatattatagtgtaatgtgaaatgctagtattaaaaaccttaaaaggttttttgttattttgcttGTTGAAAACAAAACCTATACCTATATTTTCCCATAGTGTCAATAGGTCAAAACCCGACCCAAGCCTGTGAATATTCTGTTATTATGACCctgagtgatttttttaaatacattttttttcagtaactagAGCATAAAATTGAC

Function

symbol description
tmem114 Predicted to be located in apicolateral plasma membrane. Predicted to be integral component of membrane. Predicted to be active in apical plasma membrane.

NR:

description
transmembrane protein 114

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245546.3 True 3319 mRNA 0.39 4 28633776 28662302

Neighbor

gene id symbol gene type direction distance location
LOC103034330 sept12,LOC107733855,LOC107568113,LOC107690244,LOC107738615 coding downstream 608975 27852176 ~ 28024801 (-)
LOC103033698 LOC108436663,LOC108256318,LOC105900006,LOC106596483,LOC107738612 coding downstream 1004530 27604572 ~ 27629246 (-)
alg1 alg1 coding downstream 1044478 27577763 ~ 27589298 (-)
LOC103029886 LOC107738631 coding downstream 1064374 27550309 ~ 27569402 (-)
LOC111193779 LOC108436637 coding downstream 1126408 27409879 ~ 27507368 (-)
naa60 naa60,nat15,LOC107690248,LOC107568044,LOC107685925 coding upstream 139788 28802090 ~ 28812124 (-)
eci1 NA coding upstream 159666 28821968 ~ 28829514 (-)
clcn7 clcn7,LOC107738625,LOC107590582,LOC107685922,LOC107733862,LOC107690253,LOC107568008 coding upstream 242759 28905061 ~ 28933768 (-)
ptx4 NA coding upstream 272324 28934626 ~ 28943090 (-)
usp7 usp7 coding upstream 304183 28966485 ~ 28995105 (-)
G14339 NA non-coding downstream 2962 28630590 ~ 28630814 (-)
G14333 NA non-coding downstream 83072 28550453 ~ 28550704 (-)
G14330 rbfox1 non-coding downstream 96586 28519571 ~ 28537190 (-)
G14312 NA non-coding downstream 442307 28191074 ~ 28191469 (-)
G14309 NA non-coding downstream 502788 28130252 ~ 28130988 (-)
G14394 NA non-coding upstream 35060 28697362 ~ 28715283 (-)
LOC111193842 NA non-coding upstream 150739 28813041 ~ 28815878 (-)
G14415 NA non-coding upstream 237051 28899353 ~ 28900100 (-)
G14412 NA non-coding upstream 241459 28903761 ~ 28924250 (-)
G14417 NA non-coding upstream 288443 28950745 ~ 28951228 (-)
fam214b fam214b,LOC102776582,LOC107684984,LOC107595918,LOC107672624 other downstream 1595030 27023495 ~ 27038746 (-)
G14113 NA other downstream 1731063 26899005 ~ 26902713 (-)
fam109a LOC108415891 other downstream 1800163 26824856 ~ 26833613 (-)
G13960 dscaml1 other downstream 1934983 26670119 ~ 26698793 (-)
nars2 nars2,LOC107670421,LOC107740380,LOC107724941,LOC107699825 other downstream 2617380 26002331 ~ 26016396 (-)
carhsp1 carhsp1,LOC107733846,LOC107576530,LOC107738622,LOC107590589,LOC107690249 other upstream 87232 28749534 ~ 28796458 (-)
emp2 emp2 other upstream 951184 29613486 ~ 29643303 (-)
dexi dexi,LOC107590611 other upstream 1095385 29757687 ~ 29761252 (-)
LOC111193878 NA other upstream 1226497 29888799 ~ 29892305 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other upstream 1598716 30261018 ~ 30268350 (-)

Expression


Co-expression Network